RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 POLR2J3Q9H1A7 115 aaKnown RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 HEPACAM2A8MVW5 462 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 IGSF6O95976 241 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 STK19P49842 368 aaPredicted RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 RAB25P57735 213 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 RPS13P62277 151 aaKnown RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 PUM1Q14671 1186 aaKnown RBP eCLIP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 WSCD2Q2TBF2 565 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 FAM26DQ5JW98 314 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 ATAT1Q5SQI0 421 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 AGTRAPQ6RW13 159 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 WFDC5Q8TCV5 224 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 CIDECQ96AQ7 238 aaPredicted RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 ZBED6CLQ96FA7 236 aaPredicted RBP22.02■■□□□ 1.12
NPAS3-206ENST00000548645 CLCA3PQ9Y6N3 262 aa22.02■■□□□ 1.12
NPAS3-206ENST00000548645 CENPFP49454 3210 aa22.02■■□□□ 1.11
NPAS3-206ENST00000548645 STK25O00506 426 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 CYP2A6P11509 494 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 MYL12AP19105 171 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 RPL3P39023 403 aaKnown RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 CLDN20P56880 219 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 RRAS2P62070 204 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 SERPINA13PQ6UXR4 307 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 WDR53Q7Z5U6 358 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 PDZD3Q86UT5 571 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 APCDD1Q8J025 514 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 OR52I1Q8NGK6 324 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 NECTIN4Q96NY8 510 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 NLKQ9UBE8 527 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 GSTK1Q9Y2Q3 226 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 SLC30A4O14863 429 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 LYRM1O43325 122 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 ORC5O43913 435 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 SOAT1P35610 550 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 MRPL28Q13084 256 aaKnown RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 METAP1DQ6UB28 335 aaPredicted RBP22.01■■□□□ 1.11
NPAS3-206ENST00000548645 GLCCI1Q86VQ1 547 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 SLC38A6Q8IZM9 456 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 SCRN2Q96FV2 425 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 PPP1R3EQ9H7J1 279 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 COMMD3Q9UBI1 195 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 STOML2Q9UJZ1 356 aa22.01■■□□□ 1.11
NPAS3-206ENST00000548645 FAAHO00519 579 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 CHRM5P08912 532 aaPredicted RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 ZNF30P17039 623 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 SEC23BQ15437 767 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 LAMTOR1Q6IAA8 161 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 REEP3Q6NUK4 255 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TMIGD1Q6UXZ0 262 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 CEACAM20Q6UY09 585 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 RFLNAQ6ZTI6 216 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 REM2Q8IYK8 340 aaPredicted RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 PUM2Q8TB72 1066 aaKnown RBP eCLIP22■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM39AQ9NV64 488 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 SLC43A1O75387 559 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 GSTM1P09488 218 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 FURINP09958 794 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 NR2F6P10588 404 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 AP2S1P53680 142 aaPredicted RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 DSTNP60981 165 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 PTSQ03393 145 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 CRTC2Q53ET0 693 aaPredicted RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 FUT10Q6P4F1 479 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 CNIH2Q6PI25 160 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 USP45Q70EL2 814 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 AMIGO1Q86WK6 493 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 ASZ1Q8WWH4 475 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 OR4K3Q96R72 315 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 MCUBQ9NWR8 336 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TVP23BQ9NYZ1 205 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 PLXNB3Q9ULL4 1909 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TRAV19A0A0A6YYK7 116 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 SMIM30A4D0T7 59 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 ARHGEF33A8MVX0 844 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 ELAVL4P26378 380 aaKnown RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 ETV5P41161 510 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 ETV1P50549 477 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TMC8Q8IU68 726 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 RASGRP3Q8IV61 690 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 FAM26EQ8N5C1 309 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 OR52P1PQ8NH57 321 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM163Q8TC26 289 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 BHMTQ93088 406 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TEFMQ96QE5 360 aaKnown RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 SOSTQ9BQB4 213 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 MARVELD1Q9BSK0 173 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 TMEM121BQ9BXQ6 578 aaPredicted RBP22■■□□□ 1.11
NPAS3-206ENST00000548645 B3GNT2Q9NY97 397 aa22■■□□□ 1.11
NPAS3-206ENST00000548645 B8ZZF3 427 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 SHOXO15266 292 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 TLX2O43763 284 aaPredicted RBP21.99■■□□□ 1.11
NPAS3-206ENST00000548645 FAM157BP0CG42 384 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 WNT4P56705 351 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 C2orf80Q0P641 193 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 PDE7AQ13946 482 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 ARHGEF6Q15052 776 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 LINC01599Q8WXQ3 324 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 MAP6Q96JE9 813 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 QRFPRQ96P65 431 aa21.99■■□□□ 1.11
NPAS3-206ENST00000548645 PAK6Q9NQU5 681 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms