RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MOSPD1Q9UJG1 213 aa17.59■□□□□ 0.41
PRPF40B-208ENST00000548436 SLC17A4Q9Y2C5 497 aa17.59■□□□□ 0.41
PRPF40B-208ENST00000548436 HCN4Q9Y3Q4 1203 aa17.59■□□□□ 0.41
PRPF40B-208ENST00000548436 SZT2Q5T011 3432 aa17.59■□□□□ 0.41
PRPF40B-208ENST00000548436 OR2A25A4D2G3 310 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 PRR19A6NJB7 356 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 J3QRK9 145 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 MFN2O95140 757 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 CBLP22681 906 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 ALDH4A1P30038 563 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 C21orf33P30042 268 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 IGFALSP35858 605 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 BCL6P41182 706 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 SLC19A1P41440 591 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 ST13P50502 369 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 P2RY8Q86VZ1 359 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 OR52E1Q8NGJ3 308 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 OR2L8Q8NGY9 312 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 PHF10Q8WUB8 498 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 BCL7BQ9BQE9 202 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 PSD2Q9BQI7 771 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 COPS4Q9BT78 406 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 SLC17A9Q9BYT1 436 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 PLCXD1Q9NUJ7 323 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 TBC1D23Q9NUY8 699 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 SELENONQ9NZV5 590 aa17.58■□□□□ 0.4
PRPF40B-208ENST00000548436 C4orf51C9J302 202 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 PRKRAO75569 313 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 CCNB2O95067 398 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GABRB1P18505 474 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 CD72P21854 359 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 MAT2AP31153 395 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SSR2P43308 183 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 CCT3P49368 545 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 VBP1P61758 197 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 KCNC4Q03721 635 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 TP53BP2Q13625 1128 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SHHQ15465 462 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 MLIPQ5VWP3 458 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 DNAJC22Q8N4W6 341 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 PROX1Q92786 737 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 ZNF764Q96H86 408 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 ALPK1Q96QP1 1244 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 ZNF556Q9HAH1 456 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SLC6A20Q9NP91 592 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 KCND3Q9UK17 655 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SLC6A14Q9UN76 642 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GPSM3Q9Y4H4 160 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 FAM227AF5H4B4 570 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 M0R129 80 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SLC22A1O15245 554 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SH3BP5O60239 455 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 SEMA7AO75326 666 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GASTP01350 101 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 TGFBR2P37173 567 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GSTM5P46439 218 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 HYAL2Q12891 473 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 KRT33BQ14525 404 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 NDUFAF5Q5TEU4 345 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 AQP11Q8NBQ7 271 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 PSMA8Q8TAA3 256 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GGHQ92820 318 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 ELSPBP1Q96BH3 223 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 GLIPR2Q9H4G4 154 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 NECTIN3Q9NQS3 549 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 PRDM8Q9NQV8 689 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 ACSS1Q9NUB1 689 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 TAS2R7Q9NYW3 318 aa17.57■□□□□ 0.4
PRPF40B-208ENST00000548436 PRAMEF27A3QJZ7 478 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 RFXAPO00287 272 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 PLRG1O43660 514 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 PRICKLE3O43900 615 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 RNGTTO60942 597 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 OPRL1P41146 370 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 NUDT6P53370 316 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 TRA2BP62995 288 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 ZIC1Q15915 447 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 UBE2UQ5VVX9 321 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 ZNF770Q6IQ21 691 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 TRUB1Q8WWH5 349 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 WFDC6Q9BQY6 131 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 ALOXE3Q9BYJ1 711 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 NMNAT1Q9HAN9 279 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 MRPS30Q9NP92 439 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 FKBP14Q9NWM8 211 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 TRBV4-1A0A0J9YWV2 114 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 CLCA1A8K7I4 914 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 PDZK1P1A8MUH7 402 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 ANHXE9PGG2 379 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 HAT1O14929 419 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 DDX5P17844 614 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 PEBP1P30086 187 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 MLC1Q15049 377 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 PTGES3Q15185 160 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 TMEM236Q5W0B7 351 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 KLHL17Q6TDP4 642 aa17.56■□□□□ 0.4
PRPF40B-208ENST00000548436 Q6ZNX1 250 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms