RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ZBTB2Q8N680 514 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 SIDT2Q8NBJ9 832 aaKnown RBP3.98□□□□□ -1.77
CBX5-203ENST00000547872 CLEC1AQ8NC01 280 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 CHDHQ8NE62 594 aaPredicted RBP3.98□□□□□ -1.77
CBX5-203ENST00000547872 ARRDC2Q8TBH0 407 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 TMED6Q8WW62 240 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 ST8SIA4Q92187 359 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 TM9SF4Q92544 642 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 RNF125Q96EQ8 232 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 C9orf72Q96LT7 481 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 HEMGNQ9BXL5 484 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 ABCG8Q9H221 673 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 LIME1Q9H400 295 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 MCCC2Q9HCC0 563 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 PDE7BQ9NP56 450 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 SMYD2Q9NRG4 433 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 C20orf141Q9NUB4 165 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 SOHLH2Q9NX45 425 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 PLEKHA6Q9Y2H5 1048 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 FAM96BQ9Y3D0 163 aa3.98□□□□□ -1.77
CBX5-203ENST00000547872 PCYT1BQ9Y5K3 369 aaPredicted RBP3.98□□□□□ -1.77
CBX5-203ENST00000547872 KLF2Q9Y5W3 355 aaPredicted RBP3.98□□□□□ -1.77
CBX5-203ENST00000547872 HIVEP1P15822 2718 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 TTC36A6NLP5 189 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 PDZK1P1A8MUH7 402 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 GOLGA8SH3BPF8 625 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 EPB41L2O43491 1005 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 DAB1O75553 588 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 NDUFB4O95168 129 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 ZWINTO95229 277 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 LCA5LO95447 670 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 SLC4A1P02730 911 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 MT-ND3P03897 115 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 STSP08842 583 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 EPB41P11171 864 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 EDN2P20800 178 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CAPN3P20807 821 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 ARL1P40616 181 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 CXCR3P49682 368 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 SNRPFP62306 86 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 PMP22Q01453 160 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 MYBPHQ13203 477 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CLPPQ16740 277 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 HIST2H2ACQ16777 129 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 C2CD6Q53TS8 623 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 FAM69AQ5T7M9 428 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 C1orf189Q5VU69 101 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 MLIPQ5VWP3 458 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 LRRC8EQ6NSJ5 796 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 WDR74Q6RFH5 385 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 TMEM207Q6UWW9 146 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 RFLNAQ6ZTI6 216 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 SHFQ7M4L6 423 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 SETD3Q86TU7 594 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 SLC9B2Q86UD5 537 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 C17orf82Q86X59 251 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 RAB43Q86YS6 212 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CEP57L1Q8IYX8 460 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CLIP4Q8N3C7 705 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 TTC39CQ8N584 583 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 C1orf131Q8NDD1 294 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 CATSPER1Q8NEC5 780 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 HDAC11Q96DB2 347 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 HSFY1Q96LI6 401 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 KLHL15Q96M94 604 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 USP28Q96RU2 1077 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 TMEM121Q9BTD3 319 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 TRIM62Q9BVG3 475 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 ZYG11BQ9C0D3 744 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 DMAC2Q9NW81 257 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 IRAK4Q9NWZ3 460 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CISD1Q9NZ45 108 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 WWOXQ9NZC7 414 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 OGFRQ9NZT2 677 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 CGNQ9P2M7 1197 aaKnown RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 HSPB7Q9UBY9 170 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 TBC1D29Q9UFV1 150 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 AKAP9Q99996 3911 aa3.97□□□□□ -1.77
CBX5-203ENST00000547872 SETD2Q9BYW2 2564 aaPredicted RBP3.97□□□□□ -1.77
CBX5-203ENST00000547872 NUP210LQ5VU65 1888 aa3.96□□□□□ -1.77
CBX5-203ENST00000547872 APCP25054 2843 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 IGHV5-51A0A0C4DH38 117 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 ILVBLA1L0T0 632 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 NKX2-6A6NCS4 301 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 OR52A4PA6NMU1 304 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 GTPBP1O00178 669 aaKnown RBP3.96□□□□□ -1.78
CBX5-203ENST00000547872 ACOT8O14734 319 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 HSF2BPO75031 334 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 CEACAM4O75871 244 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 SLCO2B1O94956 709 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 CLDN14O95500 239 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 AGR2O95994 175 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 MT-CYBP00156 380 aaPredicted RBP3.96□□□□□ -1.78
CBX5-203ENST00000547872 HEXAP06865 529 aa3.96□□□□□ -1.78
CBX5-203ENST00000547872 KLK3P07288 261 aaPredicted RBP3.96□□□□□ -1.78
CBX5-203ENST00000547872 ETFAP13804 333 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms