RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 GBAP04062 536 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 KLK1P06870 262 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 PRR35P0CG20 571 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 FBLP22087 321 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 OR1D4P47884 311 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ERVK-8P63133 956 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 OLR1P78380 273 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 EIF2S3LQ2VIR3 472 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 LSM12Q3MHD2 195 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 RFTN2Q52LD8 501 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 CCNYL2Q5T2Q4 361 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 PRMT9Q6P2P2 845 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 IGFL3Q6UXB1 125 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 LARP4Q71RC2 724 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ZCCHC7Q8N3Z6 543 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ACOT4Q8N9L9 421 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 CEP70Q8NHQ1 597 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 CDC26Q8NHZ8 85 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ACTRT2Q8TDY3 377 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 STON2Q8WXE9 905 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 C5orf34Q96MH7 638 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 CCDC28BQ9BUN5 200 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 NUDT9Q9BW91 350 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF717Q9BY31 904 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 DDX31Q9H8H2 851 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 KCNK13Q9HB14 408 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF304Q9HCX3 659 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 LYARQ9NX58 379 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 HCN3Q9P1Z3 774 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 MCM8Q9UJA3 840 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 EIF3LQ9Y262 564 aaKnown RBP11.37□□□□□ -0.59
HDAC7-226ENST00000547259 SLC5A6Q9Y289 635 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 B3GNT3Q9Y2A9 372 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 MAU2Q9Y6X3 613 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ABCA12Q86UK0 2595 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 LRBAP50851 2863 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 A0A0A6YYD5 115 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 WIPF3A6NGB9 483 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 A6NL46 340 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 E9PBE3 544 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 H0YIG0 161 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SCELO95171 688 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 ANXA4P09525 319 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 TPP2P29144 1249 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 MAPK12P53778 367 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 RAE1P78406 368 aaKnown RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 EMX2Q04743 252 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF763Q0D2J5 394 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SLAMF1Q13291 335 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 MYBPC3Q14896 1274 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SLC9A5Q14940 896 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 KIAA0040Q15053 153 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SMU1Q2TAY7 513 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 OGFOD2Q6N063 350 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 CA13Q8N1Q1 262 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 AMER3Q8N944 861 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 Q8NA96 180 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 OR5T3Q8NGG3 340 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 C10orf82Q8WW14 230 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 VPS50Q96JG6 964 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 FCRL1Q96LA6 429 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 GBP5Q96PP8 586 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 CCT8L2Q96SF2 557 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 YIPF2Q9BWQ6 316 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 NPLQ9BXD5 320 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-226ENST00000547259 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SIRT5Q9NXA8 310 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 PHF11Q9UIL8 331 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 FBXW2Q9UKT8 454 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 DLGAP4Q9Y2H0 992 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 SPACA6W5XKT8 324 aa11.36□□□□□ -0.59
HDAC7-226ENST00000547259 UBDO15205 165 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 TMPRSS11DO60235 418 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 SNX3O60493 162 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 GUCY1B2O75343 617 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 FAM58BPP0C7Q3 252 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 PIM1P11309 404 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-226ENST00000547259 PRPS2P11908 318 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ACPPP15309 386 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 SDC1P18827 310 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ITGAXP20702 1163 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 FOLR3P41439 243 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 SOX8P57073 446 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 RAB38P57729 211 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 DCDP81605 110 aaKnown RBP11.35□□□□□ -0.59
HDAC7-226ENST00000547259 MAT1AQ00266 395 aaKnown RBP11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ATP1A4Q13733 1029 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 RUNX2Q13950 521 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 DSG2Q14126 1118 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 SYT16Q17RD7 645 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 NKAIN1Q4KMZ8 207 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms