RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 BTBD9Q96Q07 612 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 MAP3K3Q99759 626 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 C9orf16Q9BUW7 83 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 NLNQ9BYT8 704 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 BHLHE41Q9C0J9 482 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 RMI1Q9H9A7 625 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 TRPV5Q9NQA5 729 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SIRT3Q9NTG7 399 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 OR6C2Q9NZP2 312 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SPATA7Q9P0W8 599 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 ANKMY1Q9P2S6 941 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 RAB26Q9ULW5 256 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 DUSP12Q9UNI6 340 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CACNA1HO95180 2353 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 A0A0A6YYD5 115 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 A6NHS1 94 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SUV39H1O43463 412 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 JRKO75564 520 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 ALPLP05186 524 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SMIM18P0DKX4 95 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 NR4A1P22736 598 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 RABIFP47224 123 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 FXNQ16595 210 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CCNJQ5T5M9 372 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 PAGE2Q7Z2X7 111 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 TSEN54Q7Z6J9 526 aaKnown RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CNIH3Q8TBE1 160 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 NCSTNQ92542 709 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 MAGEB10Q96LZ2 347 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 TGM7Q96PF1 710 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 PCBD2Q9H0N5 130 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CHST8Q9H2A9 424 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SLC6A14Q9UN76 642 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 MAU2Q9Y6X3 613 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 TRBC2A0A5B9 178 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CLPTM1O96005 669 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 HMGN2P05204 90 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CDH12P55289 794 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 KCNJ10P78508 379 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 KCNAB2Q13303 367 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 PDE7AQ13946 482 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 RUNX2Q13950 521 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 NNATQ16517 81 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 SMN1Q16637 294 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM151BQ8IW70 566 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 PRSS58Q8IYP2 241 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 MARVELD2Q8N4S9 558 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OR9Q2Q8NGE9 314 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OR9A4Q8NGU2 314 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM19Q96HH6 336 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 AMDHD1Q96NU7 426 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 SLC35C2Q9NQQ7 365 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 BTNL2Q9UIR0 455 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 BAG5Q9UL15 447 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TNFRSF21O75509 655 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 MED26O95402 600 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ALBP02768 609 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 FABP3P05413 133 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TFAP2AP05549 437 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CDH3P22223 829 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CD38P28907 300 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 HSD17B2P37059 387 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 GCNT6Q5T4J0 391 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ZNF425Q6IV72 752 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CARM1Q86X55 608 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 LACC1Q8IV20 430 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 ATG16L2Q8NAA4 619 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CATSPER1Q8NEC5 780 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OR2L5Q8NG80 312 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 GTPBP3Q969Y2 492 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 CLIP3Q96DZ5 547 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 NR1H4Q96RI1 486 aaPredicted RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 OR51I1Q9H343 314 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 Q9H521 79 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 DDX31Q9H8H2 851 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
CCDC38-202ENST00000546386 HCN3Q9P1Z3 774 aa11.3□□□□□ -0.6
CCDC38-202ENST00000546386 NAALAD2Q9Y3Q0 740 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms