RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CHEK2O96017 543 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PDYNP01213 254 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 KLK3P07288 261 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 C1QTNF9P0C862 333 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 UROSP10746 265 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 AGXTP21549 392 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 HIST1H1TP22492 207 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CERS1P27544 350 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 OR1D4P47884 311 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 AVPR1BP47901 424 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SLC1A6P48664 564 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PLA2G16P53816 162 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 RAB8AP61006 207 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 DCDP81605 110 aaKnown RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 HMGCS1Q01581 520 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 OCRLQ01968 901 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 STX3Q13277 289 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CUL3Q13618 768 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ABRAXAS2Q15018 415 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 NCF4Q15080 339 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 TGIF1Q15583 401 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PDCD2Q16342 344 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 IMPG1Q17R60 797 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 FBXW10Q5XX13 1052 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ATG16L1Q676U5 607 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 NIPAL1Q6NVV3 410 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ABHD17CQ6PCB6 329 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF793Q6ZN11 406 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ATG14Q6ZNE5 492 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 RNF165Q6ZSG1 346 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 COX15Q7KZN9 410 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 VASH2Q86V25 355 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 LSRQ86X29 649 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 NUDT13Q86X67 352 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF781Q8N8C0 355 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 GBP7Q8N8V2 638 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 AMER3Q8N944 861 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF248Q8NDW4 579 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SRFBP1Q8NEF9 429 aaKnown RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 FAM76AQ8TAV0 307 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 UTP15Q8TED0 518 aaKnown RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CT55Q8WUE5 264 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 TWIST2Q8WVJ9 160 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 KCNE4Q8WWG9 221 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 FGF11Q92914 225 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 KIAA1143Q96AT1 154 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 C19orf60Q96EN9 201 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 MMABQ96EY8 250 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 FAR2Q96K12 515 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 F2RL3Q96RI0 385 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 DIRC2Q96SL1 478 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINI1Q99574 410 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF717Q9BY31 904 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SPRY4Q9C004 299 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CHST8Q9H2A9 424 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 OR51B5Q9H339 312 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 KLHL31Q9H511 634 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 LHX9Q9NQ69 397 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 THAP1Q9NVV9 213 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 GFOD1Q9NXC2 390 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 HCN3Q9P1Z3 774 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 IFT80Q9P2H3 777 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 MARCOQ9UEW3 520 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 HAO1Q9UJM8 370 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CROTQ9UKG9 612 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CDC14AQ9UNH5 594 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SLC12A4Q9UP95 1085 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PADI2Q9Y2J8 665 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 RAP2CQ9Y3L5 183 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 NAALAD2Q9Y3Q0 740 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PTGDR2Q9Y5Y4 395 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 MAU2Q9Y6X3 613 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PIEZO2Q9H5I5 2752 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 CACNA1BQ00975 2339 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 C21orf140B9A014 251 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 RTCAO00442 366 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 PIP5K1BO14986 540 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 B3GALT2O43825 422 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 RSL1D1O76021 490 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF205O95201 554 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 CAPNS1P04632 268 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 JUNP05412 331 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 FGF4P08620 206 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SMIM10L1P0DMW3 83 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 PTX3P26022 381 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINB3P29508 390 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 DLSTP36957 453 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 TSFMP43897 325 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ARFIP1P53367 373 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MTTPP55157 894 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 OLR1P78380 273 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 BTN3A2P78410 334 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MAT1AQ00266 395 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 DNASE1L3Q13609 305 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SYT16Q17RD7 645 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SPIN4Q56A73 249 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 XKR7Q5GH72 579 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 DEPDC1Q5TB30 811 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms