RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF595Q8IYB9 648 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 PLPP5Q8NEB5 264 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 CNRIP1Q96F85 164 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-217ENST00000545738 CRELD1Q96HD1 420 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 PTCHD1Q96NR3 888 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 WDR77Q9BQA1 342 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-217ENST00000545738 TMEM120AQ9BXJ8 343 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 TRIM55Q9BYV6 548 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 AIG1Q9NVV5 245 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 NOP53Q9NZM5 478 aaKnown RBP15.28■□□□□ 0.04
LIMS2-217ENST00000545738 ADAM21Q9UKJ8 722 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 PADI2Q9Y2J8 665 aa15.28■□□□□ 0.04
LIMS2-217ENST00000545738 TCRBV16S1A1N1A0A5B0 115 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 VPS4BO75351 444 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 C8orf89P0DMQ9 161 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 PRKAR1AP10644 381 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 JAK1P23458 1154 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 MMP11P24347 488 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 OTX2P32243 289 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 SOX18P35713 384 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 ALDH9A1P49189 494 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 NME5P56597 212 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 HSD17B7P56937 341 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 IGLV3-21P80748 117 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-217ENST00000545738 C2orf80Q0P641 193 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 SLC13A2Q13183 592 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 SMU1Q2TAY7 513 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 RIMKLAQ8IXN7 391 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 TMEM132CQ8N3T6 1108 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 CEP70Q8NHQ1 597 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 ADAMTS18Q8TE60 1221 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 DOK4Q8TEW6 326 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 C10orf82Q8WW14 230 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 CNTNAP3BQ96NU0 1288 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 CNTNAP3Q9BZ76 1288 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 FAM107BQ9H098 131 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 SLAMF7Q9NQ25 335 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 PRDM9Q9NQV7 894 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 GPR45Q9Y5Y3 372 aa15.27■□□□□ 0.04
LIMS2-217ENST00000545738 EPG5Q9HCE0 2579 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 C1orf226A1L170 272 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 CTNSO60931 367 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 MYO1DO94832 1006 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 DDCP20711 480 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 IL12AP29459 219 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ZFP36L2P47974 494 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 SSPNQ14714 243 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 NSDHLQ15738 373 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 UGT8Q16880 541 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ANKRD37Q7Z713 158 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 MRGPREQ86SM8 312 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 TICAM1Q8IUC6 712 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ZNF681Q96N22 645 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 CATSPER2Q96P56 530 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 PFDN4Q9NQP4 134 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ZMIZ1Q9ULJ6 1067 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 LOC102723996A0A087X1L8 192 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 GMNCA6NCL1 334 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 GABRR3A8MPY1 467 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 SHOX2O60902 331 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 COX6A1P12074 109 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 UFM1P61960 85 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 EEF1A2Q05639 463 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ATP1A4Q13733 1029 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 PDE7AQ13946 482 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 OR52E8Q6IFG1 317 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 OR7A2PQ8NGA2 310 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 OR11G2Q8NGC1 345 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 OR9I1Q8NGQ6 314 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 EXOSC8Q96B26 276 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 ALOXE3Q9BYJ1 711 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 BRINP2Q9C0B6 783 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 SEMA3GQ9NS98 782 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 UTS2RQ9UKP6 389 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 MRPS33Q9Y291 106 aaKnown RBP15.26■□□□□ 0.03
LIMS2-217ENST00000545738 MMACHCQ9Y4U1 282 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 SPACA6W5XKT8 324 aa15.26■□□□□ 0.03
LIMS2-217ENST00000545738 RRP8O43159 456 aaKnown RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 GPR75O95800 540 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 PRPS2P11908 318 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 TLX1P31314 330 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 FEN1P39748 380 aaKnown RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 HEPACAMQ14CZ8 416 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 PCOLCEQ15113 449 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 IKBIPQ70UQ0 350 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 SUN3Q8TAQ9 357 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 TANKQ92844 425 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 CIDECQ96AQ7 238 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 CCDC28BQ9BUN5 200 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 FAM117AQ9C073 453 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 ZNF385DQ9H6B1 395 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 KLHL14Q9P2G3 628 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 EIF3LQ9Y262 564 aaKnown RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 DOCK10Q96BY6 2186 aa15.25■□□□□ 0.03
LIMS2-217ENST00000545738 NUP214P35658 2090 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-217ENST00000545738 CDC14CA4D256 554 aa15.24■□□□□ 0.03
LIMS2-217ENST00000545738 TMEM8BA6NDV4 472 aa15.24■□□□□ 0.03
LIMS2-217ENST00000545738 A8MUA0 341 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms