RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IL10RBQ08334 325 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 RFTN1Q14699 578 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-224ENST00000545688 TAZQ16635 292 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 LRRC37A5PQ49AS3 106 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 LBHQ53QV2 105 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-224ENST00000545688 CFAP58Q5T655 872 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 LINC00242Q5T6M2 205 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 LRRC49Q8IUZ0 686 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 KCTD6Q8NC69 237 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 CAMKVQ8NCB2 501 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 SLC26A7Q8TE54 656 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 ALKBH7Q9BT30 221 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-224ENST00000545688 KATNB1Q9BVA0 655 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 BCCIPQ9P287 314 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNHG1-224ENST00000545688 ADAMTS7Q9UKP4 1686 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 A0A1W2PP64 1363 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 KIF24Q5T7B8 1368 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CENPFP49454 3210 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 LTN1O94822 1766 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 VCANP13611 3396 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 TCP10L2B9ZVM9 353 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 IGHG1P01857 330 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 AKR1B1P15121 316 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CTNNA2P26232 953 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 SSTR1P30872 391 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CHRNA3P32297 505 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 RFC4P35249 363 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 MFAP3P55082 362 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 EVCP57679 992 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 AIMP1Q12904 312 aaKnown RBP3.38□□□□□ -1.87
SNHG1-224ENST00000545688 ZRANB3Q5FWF4 1079 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 MUC21Q5SSG8 566 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 TEX35Q5T0J7 233 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 UTF1Q5T230 341 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CST9Q5W186 159 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CFAP161Q6P656 301 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 BADQ92934 168 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CAPNS2Q96L46 248 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 TNFRSF13CQ96RJ3 184 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 MGME1Q9BQP7 344 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 CHMP4AQ9BY43 222 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 SLC39A8Q9C0K1 460 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 PNNQ9H307 717 aaKnown RBP3.38□□□□□ -1.87
SNHG1-224ENST00000545688 SPATA2Q9UM82 520 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 LTBP1Q14766 1721 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 NRXN2Q9P2S2 1712 aa3.38□□□□□ -1.87
SNHG1-224ENST00000545688 TRAV18A0A075B6X5 111 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 TRBV5-4A0A0C4DH59 114 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 SRRM4A7MD48 611 aaKnown RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 PRSS46E5RG02 174 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 C9P02748 559 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 HCKP08631 526 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 CASP2P42575 452 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 CRKLP46109 303 aaKnown RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 PRPF4BQ13523 1007 aaKnown RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 CAPRIN1Q14444 709 aaKnown RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 FAM174BQ3ZCQ3 159 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 CROCCP3Q8IVE0 287 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 BANPQ8N9N5 519 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 OR6J1Q8NGC5 347 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 RMDN2Q96LZ7 410 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 RUNDC3BQ96NL0 473 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 ALKBH3Q96Q83 286 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 TEX13BQ9BXU2 312 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 MAF1Q9H063 256 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 RPF1Q9H9Y2 349 aaKnown RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 TMOD3Q9NYL9 352 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 THYN1Q9P016 225 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 DBF4Q9UBU7 674 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-224ENST00000545688 GTF3C4Q9UKN8 822 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 IKZF3Q9UKT9 509 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 ITGB4P16144 1822 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 CARMIL3Q8ND23 1372 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 RAB3GAP2Q9H2M9 1393 aa3.37□□□□□ -1.87
SNHG1-224ENST00000545688 RGPD2P0DJD1 1756 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 ZNF253O75346 499 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 ANGPTL1O95841 491 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 PENKP01210 267 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 EEF2P13639 858 aaKnown RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 PPP5CP53041 499 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 IGLV3-21P80748 117 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 ECSCRQ19T08 205 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 TIMM50Q3ZCQ8 353 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 LRRC73Q5JTD7 316 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 KRT80Q6KB66 452 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 BTNL8Q6UX41 500 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 PPP1R21Q6ZMI0 780 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 C15orf52Q6ZUT6 534 aaKnown RBP3.36□□□□□ -1.87
SNHG1-224ENST00000545688 RAPH1Q70E73 1250 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 GPR141Q7Z602 305 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 GRK7Q8WTQ7 553 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 COG3Q96JB2 828 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 SLF1Q9BQI6 1058 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 POLR3GLQ9BT43 218 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 C5orf66Q9H5L9 145 aa3.36□□□□□ -1.87
SNHG1-224ENST00000545688 C10orf88Q9H8K7 445 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms