RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PIPSLA2A3N6 862 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 FABP12A6NFH5 140 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 C5orf58C9J3I9 102 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 POLR1CO15160 346 aaPredicted RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 PROM1O43490 865 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 MTX2O75431 263 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 CDRT1O95170 752 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 CKMT1AP12532 417 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 CPN2P22792 545 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 PTBP1P26599 531 aaKnown RBP eCLIP8.33□□□□□ -1.085e-6■■□□□ 13.3
TDP1-204ENST00000545686 ERP29P30040 261 aaKnown RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 BDKRB1P46663 353 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 STK19P49842 368 aaPredicted RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 EPHB3P54753 998 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 CASP9P55211 416 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 ARPC4P59998 168 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 RACK1P63244 317 aaKnown RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 QPRTQ15274 297 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 DUSP7Q16829 419 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 CYP27C1Q4G0S4 372 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 HENMT1Q5T8I9 393 aaKnown RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 HIST2H2AA3Q6FI13 130 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 KIAA1841Q6NSI8 718 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 SYCE2Q6PIF2 218 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 CD300LDQ6UXZ3 194 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 ZNF438Q7Z4V0 828 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 LINC00471Q8N535 108 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 OR5AK3PQ8NH89 298 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 NEURL3Q96EH8 262 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 KCTD7Q96MP8 289 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 NELL2Q99435 816 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 FUZQ9BT04 418 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 VN1R3Q9BXE9 311 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 C11orf54Q9H0W9 315 aaPredicted RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 TRIM39Q9HCM9 518 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 ABCB9Q9NP78 766 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 TIGARQ9NQ88 270 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 ACOXLQ9NUZ1 547 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 PLEKHB1Q9UF11 243 aaPredicted RBP8.33□□□□□ -1.08
TDP1-204ENST00000545686 CLEC4EQ9ULY5 219 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 DYRK1BQ9Y463 629 aa8.33□□□□□ -1.08
TDP1-204ENST00000545686 TMEM202A6NGA9 273 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 NOTOA8MTQ0 251 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 A8MV72 311 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 WASH3PC4AMC7 463 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TFECO14948 347 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 TSPAN6O43657 245 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TBX19O60806 448 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TMCC2O75069 709 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 SH3BGRLO75368 114 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 DGKGP49619 791 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TAS2R50P59544 299 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TBPL1P62380 186 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 COX10Q12887 443 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 HNRNPA0Q13151 305 aaKnown RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 SLBPQ14493 270 aaKnown RBP eCLIP8.32□□□□□ -1.08
TDP1-204ENST00000545686 TAB1Q15750 504 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 DUSP6Q16828 381 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 LEXMQ3ZCV2 418 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CCSMST1Q4G0I0 132 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 C3orf38Q5JPI3 329 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ZNF648Q5T619 568 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 LCN1P1Q5VSP4 162 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 LIPKQ5VXJ0 399 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 SAXO2Q658L1 398 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 PGBD2Q6P3X8 592 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 METAP1DQ6UB28 335 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 GDPD4Q6W3E5 623 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 DPY19L3Q6ZPD9 716 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ZFAND1Q8TCF1 268 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 UBE2E3Q969T4 207 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 DIRAS2Q96HU8 199 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 SGPP1Q9BX95 441 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 POLR2J3Q9H1A7 115 aaKnown RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 MMP28Q9H239 520 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 NIPAL2Q9H841 368 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ANKRA2Q9H9E1 313 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 RANGRFQ9HD47 186 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 RHCGQ9UBD6 479 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TESQ9UGI8 421 aaKnown RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 A0A1W2PQL4 384 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 TMEM129A0AVI4 362 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 OR2AG2A6NM03 316 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 HEPACAM2A8MVW5 462 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 FAM227AF5H4B4 570 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 H3BN98 237 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 PRRG1O14668 218 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 GRM6O15303 877 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 OR10H3O60404 316 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 KLHL18O94889 574 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 MYCP01106 439 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 TSPAN19P0C672 248 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms