RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 AZGP1P25311 298 aaKnown RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CEACAM8P31997 349 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 SLC11A2P49281 568 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 RAB5BP61020 215 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CCDC157Q569K6 752 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 ARMC12Q5T9G4 340 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 C1orf53Q5VUE5 145 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 EFCAB12Q6NXP0 572 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 SSX7Q7RTT5 188 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 SERPINA12Q8IW75 414 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 FIBINQ8TAL6 211 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 L3HYPDHQ96EM0 354 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 DCUN1D1Q96GG9 259 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 PNMA5Q96PV4 448 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 MRI1Q9BV20 369 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 PDZD7Q9H5P4 517 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 MRPL22Q9NWU5 206 aaKnown RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CXXC1Q9P0U4 656 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 MKLN1Q9UL63 735 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 A0A0G2JND7 137 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 HELTA6NFD8 242 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 PRRG1O14668 218 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 NME2P1O60361 137 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 DDTP30046 118 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 GRIA4P48058 902 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 IL2P60568 153 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 KCNMB1Q16558 191 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CREB3L2Q70SY1 520 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 STX19Q8N4C7 294 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 NT5C3BQ969T7 300 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 CREB3L1Q96BA8 519 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 THOC3Q96J01 351 aaKnown RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF512Q96ME7 567 aaPredicted RBP8.52□□□□□ -1.05
VPS13D-212ENST00000543766 XPNPEP3Q9NQH7 507 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 FBXO8Q9NRD0 319 aa8.52□□□□□ -1.05
VPS13D-212ENST00000543766 PLIN3O60664 434 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF821O75541 412 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 IL18RAPO95256 599 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SAGP10523 405 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RPA2P15927 270 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PTGER4P35408 488 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CCR5P51681 352 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RGS1Q08116 209 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 VWA1Q6PCB0 445 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RNF165Q6ZSG1 346 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF573Q86YE8 665 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RBM45Q8IUH3 476 aaKnown RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SCN4BQ8IWT1 228 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 GCNT2Q8N0V5 402 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 COLGALT1Q8NBJ5 622 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CHDHQ8NE62 594 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 LARP4BQ92615 738 aaKnown RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 MYO19Q96H55 970 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 KCTD14Q9BQ13 255 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TMEM208Q9BTX3 173 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 GPR88Q9GZN0 384 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 GREM2Q9H772 168 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 DMRT3Q9NQL9 472 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TAS2R9Q9NYW1 312 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TLR6Q9Y2C9 796 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SCN4AP35499 1836 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 LGALS8O00214 317 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 KLF11O14901 512 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CYP26A1O43174 497 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PAPSS2O95340 614 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 UGT2B10P36537 528 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ETV4P43268 484 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SERPINB10P48595 397 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 KIAA1024LP59773 190 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 IL5RAQ01344 420 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ACSM1Q08AH1 577 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SNTB2Q13425 540 aaKnown RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 UBE2SQ16763 222 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 AMZ1Q400G9 498 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 TMIGD1Q6UXZ0 262 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ARRDC1Q8N5I2 433 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 C1orf162Q8NEQ5 155 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 DCAKDQ8WVC6 231 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 S100ZQ8WXG8 99 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ACDQ96AP0 544 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RNF125Q96EQ8 232 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
VPS13D-212ENST00000543766 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 MTG2Q9H4K7 406 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 BCO1Q9HAY6 547 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 CSNK1G3Q9Y6M4 447 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 PTPRFP10586 1907 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 ASB14A6NK59 587 aa8.51□□□□□ -1.05
VPS13D-212ENST00000543766 H3BMQ9 156 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms