RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 Q6ZVL8 140 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 DPPA4Q7L190 304 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 DDX53Q86TM3 631 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 GPR65Q8IYL9 337 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 NRSN1Q8IZ57 195 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 C17orf50Q8WW18 174 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TOX2Q96NM4 488 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 RIOK2Q9BVS4 552 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TRIM39Q9HCM9 518 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 PRM3Q9NNZ6 103 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 DDX28Q9NUL7 540 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TRBV4-1A0A0J9YWV2 114 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 ANKRD34BA5PLL1 514 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 H3BM21 787 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 FFAR1O14842 300 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 KLHL18O94889 574 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CXCL10P02778 98 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CPEP16870 476 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SOX3P41225 446 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CTSCP53634 463 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 MRPS15P82914 257 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CYP4F8P98187 520 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 MC1RQ01726 317 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 COX10Q12887 443 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 DOC2BQ14184 412 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 HEPACAMQ14CZ8 416 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 NXPE4Q6UWF7 544 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 Q6ZVU0 165 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TECPR1Q7Z6L1 1165 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 LAX1Q8IWV1 398 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 PHC2Q8IXK0 858 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 RDH10Q8IZV5 341 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 OR2A12Q8NGT7 310 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 FUZQ9BT04 418 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TSSK6Q9BXA6 273 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
VPS33A-208ENST00000543633 MIEF1Q9NQG6 463 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 AHSPQ9NZD4 102 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 TMEM98Q9Y2Y6 226 aa13.06□□□□□ -0.32
VPS33A-208ENST00000543633 MTCL1Q9Y4B5 1905 aaKnown RBP13.05□□□□□ -0.32
VPS33A-208ENST00000543633 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 MEIOCA2RUB1 952 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 LEFTY2O00292 366 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 MFN2O95140 757 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 RAB36O95755 333 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 IL3P08700 152 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 HBQ1P09105 142 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 POU1F1P28069 291 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
VPS33A-208ENST00000543633 GSTM5P46439 218 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 LBX1P52954 281 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 BNC1Q01954 994 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 TLE2Q04725 743 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 HYAL2Q12891 473 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 TP53BP2Q13625 1128 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 DUSP7Q16829 419 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 C3orf38Q5JPI3 329 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 GALNT12Q8IXK2 581 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 VWA5B2Q8N398 1253 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 OR9A1PQ8NGU1 263 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 OR5AK3PQ8NH89 298 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 SLC5A11Q8WWX8 675 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 ZNF354BQ96LW1 612 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 GDF15Q99988 308 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 MRPS18AQ9NVS2 196 aaKnown RBP13.05□□□□□ -0.32
VPS33A-208ENST00000543633 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 TAAR2Q9P1P5 351 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 MUTYHQ9UIF7 546 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 CYP17A1P05093 508 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 ALPPP05187 535 aa13.05□□□□□ -0.32
VPS33A-208ENST00000543633 YES1P07947 543 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms