RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ALKBH4Q9NXW9 302 aa16.1■□□□□ 0.17
PPP1CA-210ENST00000542876 LIPGQ9Y5X9 500 aa16.1■□□□□ 0.17
PPP1CA-210ENST00000542876 SETD2Q9BYW2 2564 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 CXorf49A8MYA2 514 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 KLK8O60259 260 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 HCN1O60741 890 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SCELO95171 688 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 GLI4P10075 376 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 CCL3P10147 92 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 TLX1P31314 330 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 CASP2P42575 452 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 STT3AP46977 705 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 RAP1GDS1P52306 607 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 KCNJ2P63252 427 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 PLIN5Q00G26 463 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 FOXO1Q12778 655 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 CBLBQ13191 982 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 HYAL4Q2M3T9 481 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 PIGGQ5H8A4 983 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 KHDRBS2Q5VWX1 349 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SLC22A10Q63ZE4 541 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 OR4N5Q8IXE1 308 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 NUBPLQ8TB37 319 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 ZNF721Q8TF20 911 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 ANKRD9Q96BM1 317 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SENP5Q96HI0 755 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 NAPGQ99747 312 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 RPF2Q9H7B2 306 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SAYSD1Q9NPB0 183 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 TUBA8Q9NY65 449 aaPredicted RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 NUDT4Q9NZJ9 180 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 OPTCQ9UBM4 332 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 ADGRE2Q9UHX3 823 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 ATG4BQ9Y4P1 393 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 SPG11Q96JI7 2443 aa16.09■□□□□ 0.17
PPP1CA-210ENST00000542876 MTORP42345 2549 aa16.08■□□□□ 0.17
PPP1CA-210ENST00000542876 TRGV5A0A0B4J1U4 118 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 SAP18O00422 153 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 FGF17O60258 216 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ZNF354AO60765 605 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 GABRA1P14867 456 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 EPORP19235 508 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 SPRP35270 261 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 PIGAP37287 484 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ART1P52961 327 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 SLAMF1Q13291 335 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ZKSCAN8Q15776 578 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 C1orf185Q5T7R7 199 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 OR4C11Q6IEV9 310 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 C3orf62Q6ZUJ4 267 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 TBC1D1Q86TI0 1168 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 CTAGE3PQ8IX95 158 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 LAS2Q8IYD9 372 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 DND1Q8IYX4 353 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 OR7G3Q8NG95 312 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 TANKQ92844 425 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 UBXN10Q96LJ8 280 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ALG9Q9H6U8 611 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 NMRAL1Q9HBL8 299 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 PHF11Q9UIL8 331 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 BOKQ9UMX3 212 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ANGPTL3Q9Y5C1 460 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 FAM215AQ9Y5M1 114 aa16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 INTS1Q8N201 2190 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-210ENST00000542876 ZNF407Q9C0G0 2248 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 IQANK1A0A1B0GTG1 560 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 TCRBV9S1A1TA0A576 114 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SUPT3HB4E1H0 165 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 K7EPI3 171 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SUPT3HO75486 399 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 CELA3AP09093 270 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 BUD31P41223 144 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 DDX39BQ13838 428 aaKnown RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SLC25A35Q3KQZ1 300 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 DEPDC1Q5TB30 811 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 GRTP1Q5TC63 336 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 CYS1Q717R9 158 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SLC29A4Q7RTT9 530 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 GPR180Q86V85 440 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 MYLK4Q86YV6 388 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 RGMAQ96B86 450 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 PPWD1Q96BP3 646 aaKnown RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SPACA9Q96E40 222 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 PELOQ9BRX2 385 aaKnown RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 OR51B5Q9H339 312 aa16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 SEMA4BQ9NPR2 832 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 RYDENQ9NUL5 291 aaKnown RBP16.07■□□□□ 0.16
PPP1CA-210ENST00000542876 A0A0G2JNJ9 132 aa16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 FAM159BA6NKW6 160 aa16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 OR10H2O60403 315 aa16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 IGKV3-11P04433 115 aa16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 GSTA2P09210 222 aa16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 ALOX15P16050 662 aaPredicted RBP16.06■□□□□ 0.16
PPP1CA-210ENST00000542876 EPB42P16452 691 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms