RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MAGEA10P43363 369 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 GSSP48637 474 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 PRIM2P49643 509 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TMED10P49755 219 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CRISP1P54107 249 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CASP9P55211 416 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TAS2R50P59544 299 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CDC42P60953 191 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 RHAGQ02094 409 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC13A2Q13183 592 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ILKQ13418 452 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 DOC2BQ14184 412 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 MAPK11Q15759 364 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF77Q15935 545 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 LRIT3Q3SXY7 679 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SOWAHCQ53LP3 525 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SLX4IPQ5VYV7 408 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SAXO2Q658L1 398 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 PLAG1Q6DJT9 500 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 HIST2H2AA3Q6FI13 130 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC39A5Q6ZMH5 540 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF765Q7L2R6 523 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC9B2Q86UD5 537 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM129CQ86XR2 697 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SYTL1Q8IYJ3 562 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 C7orf61Q8IZ16 206 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CYP4Z2PQ8N1L4 340 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 IL17RCQ8NAC3 791 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 AQP11Q8NBQ7 271 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 GALNT6Q8NCL4 622 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 KREMEN2Q8NCW0 462 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM83FQ8NEG4 500 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 VN1R2Q8NFZ6 395 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 OR52J3Q8NH60 311 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 HPS1Q92902 700 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 UBE2E3Q969T4 207 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 NEURL3Q96EH8 262 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF764Q96H86 408 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 OR5M11Q96RB7 305 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SDHCQ99643 169 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CORO1BQ9BR76 489 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 FUZQ9BT04 418 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF717Q9BY31 904 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 LINC00597Q9H2U6 94 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SPNS1Q9H2V7 528 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 RHBGQ9H310 441 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 OR51B5Q9H339 312 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 RNF167Q9H6Y7 350 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 CXorf36Q9H7Y0 433 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF556Q9HAH1 456 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 NMNAT1Q9HAN9 279 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SIAEQ9HAT2 523 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TRIM39Q9HCM9 518 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 PRDM8Q9NQV8 689 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ABCB10Q9NRK6 738 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SACM1LQ9NTJ5 587 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 IMPAD1Q9NX62 359 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TAAR2Q9P1P5 351 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 REV1Q9UBZ9 1251 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 DUSP12Q9UNI6 340 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ANGPT4Q9Y264 503 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TRAPPC4Q9Y296 219 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 LSM2Q9Y333 95 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 DYRK1BQ9Y463 629 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 PEX16Q9Y5Y5 336 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 MTCL1Q9Y4B5 1905 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A1W2PNR3 127 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 HTR3EA5X5Y0 456 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM221BA6H8Z2 402 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 LOC110117498-PIK3R3F6TDL0 507 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 M0R129 80 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CCRL2O00421 344 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DLL1O00548 723 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SOX1O00570 391 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ZW10O43264 779 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 TBX1O43435 398 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 PI15O43692 258 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KIAA0513O60268 411 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SEMA7AO75326 666 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FGF18O76093 207 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SLITRK5O94991 958 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SEMA3DO95025 777 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MFN2O95140 757 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OXSR1O95747 527 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 FGF19O95750 216 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 GBAP04062 536 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 IFNW1P05000 195 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 EIF2S1P05198 315 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SCG5P05408 212 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 KLK1P06870 262 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 IL3P08700 152 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 CISD3P0C7P0 127 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ELFN1P0C7U0 828 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 ERGP11308 486 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 OSMP13725 252 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 EDN3P14138 238 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 SPNP16150 400 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 DDCP20711 480 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 MSX1P28360 303 aa4.93□□□□□ -1.62
ATPAF1-212ENST00000542495 S100A5P33763 92 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms