RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OR2B2Q9GZK3 357 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 TMEM245Q9H330 911 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ANKRA2Q9H9E1 313 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 CTPS2Q9NRF8 586 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 SLC27A6Q9Y2P4 619 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 N6AMT1Q9Y5N5 214 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 SCO2O43819 266 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 TPST2O60704 377 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 MFN2O95140 757 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 FGF19O95750 216 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 BCHEP06276 602 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 DRD3P35462 400 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 LSM11P83369 360 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX55-209ENST00000542286 DOC2BQ14184 412 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 ZNF181Q2M3W8 571 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 PGBD3Q8N328 593 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 LINC01555Q8NAE3 123 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 VANGL1Q8TAA9 524 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 SP7Q8TDD2 431 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 APOL4Q9BPW4 351 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 YIPF4Q9BSR8 244 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 RPP25Q9BUL9 199 aaKnown RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 ZNF717Q9BY31 904 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 ZCCHC2Q9C0B9 1178 aaKnown RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 ACOT13Q9NPJ3 140 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 A0A1W2PP55 124 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 RGS10O43665 173 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 NARSO43776 548 aaKnown RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 TMPRSS11DO60235 418 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 OPRD1P41143 372 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 ELP6Q0PNE2 266 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 KEAP1Q14145 624 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 CCDC58Q4VC31 144 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 PIP5KL1Q5T9C9 394 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 CEACAM20Q6UY09 585 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 WDR53Q7Z5U6 358 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 CAMKMTQ7Z624 323 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 FAM129CQ86XR2 697 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 ZNF557Q8N988 423 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 SETD9Q8NE22 299 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 OR52N2Q8NGI0 321 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 OR5D16Q8NGK9 328 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 MAGEB10Q96LZ2 347 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 IMP3Q9NV31 184 aaKnown RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 PRKAG2Q9UGJ0 569 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 UGT2A1Q9Y4X1 527 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 TRBC2A0A5B9 178 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SH3BP5O60239 455 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SEMA7AO75326 666 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SOX14O95416 240 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 HNRNPA1P09651 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX55-209ENST00000542286 GTF2E2P29084 291 aaKnown RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 LIPAP38571 399 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 C21orf58P58505 322 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 CDK3Q00526 305 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
DDX55-209ENST00000542286 REPS1Q96D71 796 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 ZHX1-C8orf76Q96EF9 292 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SYNPO2LQ9H987 977 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 LHX9Q9NQ69 397 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 SCN3BQ9NY72 215 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
DDX55-209ENST00000542286 KMOO15229 486 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 OR1F1O43749 312 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 ST13P50502 369 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 MAPK12P53778 367 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 RACK1P63244 317 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 PDE7AQ13946 482 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 FGL2Q14314 439 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.16
DDX55-209ENST00000542286 IFI44LQ53G44 452 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PNCKQ6P2M8 343 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PDZD3Q86UT5 571 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 COMTD1Q86VU5 262 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 ASCC1Q8N9N2 400 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 KXD1Q9BQD3 176 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 OSGIN1Q9UJX0 560 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 TPRKBQ9Y3C4 175 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 SAGE2PA6NJ88 616 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 FOXE1O00358 373 aaPredicted RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 PTTG1O95997 202 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 STSP08842 583 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PRKCAP17252 672 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 GRK5P34947 590 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 LIM2P55344 173 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 EEF1A2Q05639 463 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 TP53BP2Q13625 1128 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 SYT6Q5T7P8 510 aaPredicted RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 RFPL4BQ6ZWI9 263 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 SPATC1Q76KD6 591 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PRSS48Q7RTY5 328 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 BCDIN3DQ7Z5W3 292 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 TSPYL5Q86VY4 417 aaPredicted RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 C17orf64Q86WR6 236 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 KLHDC8AQ8IYD2 350 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 TMIEQ8NEW7 156 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 WFIKKN2Q8TEU8 576 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 RAD51AP1Q96B01 352 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms