RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 DEPDC1Q5TB30 811 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 HIST2H2AA3Q6FI13 130 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 RTL6Q6ICC9 239 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 OR4C11Q6IEV9 310 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 ARHGAP11AQ6P4F7 1023 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 RTL4Q6ZR62 310 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 SENP5Q96HI0 755 aaPredicted RBP18.37■□□□□ 0.53
DDX11-220ENST00000542244 MTERF1Q99551 399 aaKnown RBP18.37■□□□□ 0.53
DDX11-220ENST00000542244 PROK2Q9HC23 129 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 OPTCQ9UBM4 332 aa18.37■□□□□ 0.53
DDX11-220ENST00000542244 ESYT3A0FGR9 886 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 GLOD5A6NK44 160 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 TMPRSS11DO60235 418 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 LTA4HP09960 611 aaKnown RBP18.36■□□□□ 0.53
DDX11-220ENST00000542244 ENDOUP21128 410 aaKnown RBP18.36■□□□□ 0.53
DDX11-220ENST00000542244 SSTR2P30874 369 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 STT3AP46977 705 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 PIK3CGP48736 1102 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 RPS13P62277 151 aaKnown RBP18.36■□□□□ 0.53
DDX11-220ENST00000542244 SLC7A5Q01650 507 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 FOLH1Q04609 750 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 PCDH1Q08174 1060 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 TGM3Q08188 693 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 AP5B1Q2VPB7 878 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 TMEM35AQ53FP2 167 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 PIGGQ5H8A4 983 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 GRHL2Q6ISB3 625 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 GPALPP1Q8IXQ4 340 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 CNPPD1Q9BV87 410 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 PHACTR1Q9C0D0 580 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 NMRAL1Q9HBL8 299 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 PRM3Q9NNZ6 103 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 SH2D2AQ9NP31 389 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 DMRT3Q9NQL9 472 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 FAM215AQ9Y5M1 114 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 CELSR1Q9NYQ6 3014 aa18.36■□□□□ 0.53
DDX11-220ENST00000542244 ATP6AP2A0A1C7CYW4 349 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 ATP6AP2O75787 350 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 CLPSP04118 112 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 GSTA2P09210 222 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 RFPL3SP0C7P2 107 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 NEK2P51955 445 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 SERTAD2Q14140 314 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 ZNF791Q3KP31 576 aaPredicted RBP18.35■□□□□ 0.53
DDX11-220ENST00000542244 MROH9Q5TGP6 573 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 TRILQ7L0X0 811 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 MAATS1Q7Z4T9 603 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 LIX1LQ8IVB5 337 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 OR8K3Q8NH51 312 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 LILRB4Q8NHJ6 448 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 C14orf79Q96F83 325 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 CMTM7Q96FZ5 175 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 GPR78Q96P69 363 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 FAM173AQ9BQD7 235 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 TP63Q9H3D4 680 aaPredicted RBP18.35■□□□□ 0.53
DDX11-220ENST00000542244 ZNF358Q9NW07 568 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 COQ3Q9NZJ6 369 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 F8P00451 2351 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 HCFC1P51610 2035 aa18.35■□□□□ 0.53
DDX11-220ENST00000542244 CCDC168Q8NDH2 2452 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 NCKAP5O14513 1909 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 A0A1W2PR48 441 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 SIX3O95343 332 aaPredicted RBP18.34■□□□□ 0.53
DDX11-220ENST00000542244 IGHG3P01860 377 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 GBAP04062 536 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 C2P06681 752 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 RCN2Q14257 317 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 TESK1Q15569 626 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 PFKFB4Q16877 469 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 PRAMEF20Q5VT98 475 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 ZNF585AQ6P3V2 769 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 TMEM64Q6YI46 380 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 FAM47EQ6ZV65 393 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 CHSY3Q70JA7 882 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 TBC1D1Q86TI0 1168 aaPredicted RBP18.34■□□□□ 0.53
DDX11-220ENST00000542244 MYLK4Q86YV6 388 aaPredicted RBP18.34■□□□□ 0.53
DDX11-220ENST00000542244 PLD6Q8N2A8 252 aaKnown RBP18.34■□□□□ 0.53
DDX11-220ENST00000542244 RND1Q92730 232 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 DGAT2Q96PD7 388 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 SMC6Q96SB8 1091 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 ROGDIQ9GZN7 287 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 RPF2Q9H7B2 306 aaKnown RBP18.34■□□□□ 0.53
DDX11-220ENST00000542244 IL1RL2Q9HB29 575 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 SPRR3Q9UBC9 169 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 RNF11Q9Y3C5 154 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 ASB4Q9Y574 426 aa18.34■□□□□ 0.53
DDX11-220ENST00000542244 HIVEP1P15822 2718 aa18.33■□□□□ 0.53
DDX11-220ENST00000542244 KDM4EB2RXH2 506 aaPredicted RBP18.33■□□□□ 0.52
DDX11-220ENST00000542244 GLI4P10075 376 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 CRABP2P29373 138 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 HPDP32754 393 aaPredicted RBP18.33■□□□□ 0.52
DDX11-220ENST00000542244 BSGP35613 385 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 ADH7P40394 386 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 HERVK_113P63132 956 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 ERVK-8P63133 956 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 TNFRSF17Q02223 184 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 SETDB1Q15047 1291 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 MRM1Q6IN84 353 aaKnown RBP18.33■□□□□ 0.52
DDX11-220ENST00000542244 GPR180Q86V85 440 aa18.33■□□□□ 0.52
DDX11-220ENST00000542244 SRFBP1Q8NEF9 429 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms