RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C10orf62Q5T681 223 aaPredicted RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 ABHD17BQ5VST6 288 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 CLEC6AQ6EIG7 209 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 SPINK14Q6IE38 97 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 TUBA3EQ6PEY2 450 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 RPS19BP1Q86WX3 136 aaKnown RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 NUDT13Q86X67 352 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ARMC10Q8N2F6 343 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 C1orf52Q8N6N3 182 aaKnown RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ZNF721Q8TF20 911 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 THAP3Q8WTV1 239 aaPredicted RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 TM9SF4Q92544 642 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 TANKQ92844 425 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 NCLNQ969V3 563 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ZNF354BQ96LW1 612 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 TAAR6Q96RI8 345 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 HES7Q9BYE0 225 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 SLC29A3Q9BZD2 475 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 EPS8L2Q9H6S3 715 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ADAP2Q9NPF8 381 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 RRAGDQ9NQL2 400 aaPredicted RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 ASF1BQ9NVP2 202 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 LYARQ9NX58 379 aaKnown RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 MS4A12Q9NXJ0 267 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ADAM29Q9UKF5 820 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 CCL27Q9Y4X3 112 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 PTGDR2Q9Y5Y4 395 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 TENM4Q6N022 2769 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 NUP210LQ5VU65 1888 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 DOCK10Q96BY6 2186 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 SCN2AQ99250 2005 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TRBV11-1A0A0K0K1C0 115 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 C17orf105B2RV13 164 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TCP11X1B4DZS4 312 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 RGS16O15492 202 aaPredicted RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 ZNF354AO60765 605 aaPredicted RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 TRIM13O60858 407 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 KRT6AP02538 564 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 CLPSP04118 112 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 KRT6BP04259 564 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 ENO1P06733 434 aaKnown RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 TUBBP07437 444 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 CHRNGP07510 517 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TNNI3P19429 210 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 HMOX2P30519 316 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 STT3AP46977 705 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 KRT6CP48668 564 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 BTKQ06187 659 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■□□□□ 10.8
YBX3-212ENST00000542002 CSTF3Q12996 717 aaKnown RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 SERTAD2Q14140 314 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 RCN2Q14257 317 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TLR1Q15399 786 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 MEP1AQ16819 746 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 UGT3A2Q3SY77 523 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 CFAP157Q5JU67 520 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 NDUFAF5Q5TEU4 345 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 FAM180BQ6P0A1 224 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 ZCCHC23Q6ZST2 131 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 SLC2A12Q8TD20 617 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 SENP5Q96HI0 755 aaPredicted RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 SMC6Q96SB8 1091 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 RNF32Q9H0A6 362 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 TUBB1Q9H4B7 451 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 ZNF395Q9H8N7 513 aaPredicted RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 AHSPQ9NZD4 102 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 HEY2Q9UBP5 337 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 CLCA3PQ9Y6N3 262 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 SPACA6W5XKT8 324 aa9.06□□□□□ -0.96
YBX3-212ENST00000542002 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
YBX3-212ENST00000542002 FASNP49327 2511 aaKnown RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 DYTNA2CJ06 578 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 BLACEA4D250 179 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 OR5H15A6NDH6 313 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 GABRR3A8MPY1 467 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 TMEM233B4DJY2 109 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 NEURL1O76050 574 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 CBX6O95503 412 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 IGKV3-11P04433 115 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 BPGMP07738 259 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 CT62P0C5K7 136 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 NR2F6P10588 404 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 HSD3B1P14060 373 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 HSD3B2P26439 372 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 TLX1P31314 330 aaPredicted RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 PTGER1P34995 402 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 BUD31P41223 144 aaPredicted RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 UQCRFS1P47985 274 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 CLCN2P51788 898 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 MAPK12P53778 367 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms