RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 BMPERQ8N8U9 685 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 BHLHE22Q8NFJ8 381 aaPredicted RBP26.24■■□□□ 1.79
CCM2-218ENST00000541586 UCN3Q969E3 161 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 KCTD14Q9BQ13 255 aaPredicted RBP26.24■■□□□ 1.79
CCM2-218ENST00000541586 FAIM2Q9BWQ8 316 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 ROGDIQ9GZN7 287 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 SPRTNQ9H040 489 aaPredicted RBP26.24■■□□□ 1.79
CCM2-218ENST00000541586 RNPEPL1Q9HAU8 725 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 FBXW2Q9UKT8 454 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 RARRES3Q9UL19 164 aa26.24■■□□□ 1.79
CCM2-218ENST00000541586 MRPS2Q9Y399 296 aaKnown RBP26.24■■□□□ 1.79
CCM2-218ENST00000541586 H0Y3Z8 333 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 NVLO15381 856 aaKnown RBP26.23■■□□□ 1.79
CCM2-218ENST00000541586 GUCY1B2O75343 617 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 DEFB134Q4QY38 66 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 OR4A15Q8NGL6 344 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 OR1L3Q8NH93 324 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 ZNF764Q96H86 408 aaPredicted RBP26.23■■□□□ 1.79
CCM2-218ENST00000541586 ECSITQ9BQ95 431 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 PIF1Q9H611 641 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 DCLRE1BQ9H816 532 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 C5AR2Q9P296 337 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 SPTBP11277 2137 aa26.23■■□□□ 1.79
CCM2-218ENST00000541586 A0A1W2PR48 441 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 DNAJA2O60884 412 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 ALOX12P18054 663 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 GABREP78334 506 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 BNIP2Q12982 314 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 PRAMEF17Q5VTA0 474 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 FAM180BQ6P0A1 224 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 PPP1R3BQ86XI6 285 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 SLC26A7Q8TE54 656 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 PMEPA1Q969W9 287 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 PHF12Q96QT6 1004 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 NLNQ9BYT8 704 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 RASSF4Q9H2L5 321 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 FBXO8Q9NRD0 319 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 LYARQ9NX58 379 aaKnown RBP26.22■■□□□ 1.79
CCM2-218ENST00000541586 NKX1-2Q9UD57 310 aaPredicted RBP26.22■■□□□ 1.79
CCM2-218ENST00000541586 EGFL7Q9UHF1 273 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 BCAP29Q9UHQ4 241 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 USP22Q9UPT9 525 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 B4E171 279 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 SRPX2O60687 465 aaPredicted RBP26.22■■□□□ 1.79
CCM2-218ENST00000541586 OR2B3O76000 313 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 C6orf47O95873 294 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 TSPAN7P41732 249 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 HBA1P69905 142 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 GPR135Q8IZ08 494 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 GOT1L1Q8NHS2 421 aaPredicted RBP26.22■■□□□ 1.79
CCM2-218ENST00000541586 SERINC2Q96SA4 455 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 MAPKAP1Q9BPZ7 522 aa26.22■■□□□ 1.79
CCM2-218ENST00000541586 KAT8Q9H7Z6 458 aaKnown RBP26.22■■□□□ 1.79
CCM2-218ENST00000541586 A0A1W2PRB8 838 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 PRKRAO75569 313 aaKnown RBP26.21■■□□□ 1.79
CCM2-218ENST00000541586 TNFSF15O95150 251 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 ZCCHC18P0CG32 403 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 DDX5P17844 614 aaKnown RBP26.21■■□□□ 1.79
CCM2-218ENST00000541586 ITGA1P56199 1179 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 IL11RAQ14626 422 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 OR10A6Q8NH74 314 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 EXOSC8Q96B26 276 aaKnown RBP26.21■■□□□ 1.79
CCM2-218ENST00000541586 ZNF583Q96ND8 569 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 POLR1BQ9H9Y6 1135 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 TAS2R7Q9NYW3 318 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 EHD3Q9NZN3 535 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 PCDHGB4Q9UN71 923 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 AP3M1Q9Y2T2 418 aa26.21■■□□□ 1.79
CCM2-218ENST00000541586 PROM1O43490 865 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 AIFM1O95831 613 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 C1QCP02747 245 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 ABCB1P08183 1280 aaPredicted RBP26.2■■□□□ 1.79
CCM2-218ENST00000541586 MSL3P1P0C860 447 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 ZNF10P21506 573 aaPredicted RBP26.2■■□□□ 1.79
CCM2-218ENST00000541586 RCN1Q15293 331 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 DCAF12Q5T6F0 453 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 DHFR2Q86XF0 187 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 PTRH1Q86Y79 214 aaKnown RBP26.2■■□□□ 1.79
CCM2-218ENST00000541586 NATD1Q8N6N6 113 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 ENDOVQ8N8Q3 282 aaKnown RBP26.2■■□□□ 1.79
CCM2-218ENST00000541586 TAAR9Q96RI9 348 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 SLAMF7Q9NQ25 335 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 VPS4AQ9UN37 437 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 B3GALT1Q9Y5Z6 326 aa26.2■■□□□ 1.79
CCM2-218ENST00000541586 NUP214P35658 2090 aaPredicted RBP26.2■■□□□ 1.78
CCM2-218ENST00000541586 SCN3AQ9NY46 2000 aa26.2■■□□□ 1.78
CCM2-218ENST00000541586 C1orf226A1L170 272 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 GLOD5A6NK44 160 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 CLIC1O00299 241 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 PDPK1O15530 556 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 FKBP6O75344 327 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 IL1RNP18510 177 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 HTR1EP28566 365 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 SOX11P35716 441 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 OR4D2P58180 307 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 GAB1Q13480 694 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 C18orf63Q68DL7 685 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 CYP2R1Q6VVX0 501 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 PRSS41Q7RTY9 318 aa26.19■■□□□ 1.78
CCM2-218ENST00000541586 PYDC1Q8WXC3 89 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms