RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RMND5BQ96G75 393 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 ZDHHC12Q96GR4 267 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ZNF583Q96ND8 569 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 TGM7Q96PF1 710 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 SLC29A1Q99808 456 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 KCTD14Q9BQ13 255 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 THUMPD3Q9BV44 507 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 EPB41L1Q9H4G0 881 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 FAM60AQ9NP50 221 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 TEX10Q9NXF1 929 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 BTNL2Q9UIR0 455 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 FRYLO94915 3013 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 C7orf72A4D263 438 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 HTR3EA5X5Y0 456 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 MYF5P13349 255 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 DDX5P17844 614 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 ATP6V1B2P21281 511 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 GPR3P46089 330 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 BTN3A2P78410 334 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 NR1D2Q14995 579 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 TTC33Q6PID6 262 aaPredicted RBP8.23□□□□□ -1.09
THBS3-210ENST00000541576 ABHD13Q7L211 337 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ZCCHC10Q8TBK6 192 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 FAIM2Q9BWQ8 316 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 ROGDIQ9GZN7 287 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 RAB33BQ9H082 229 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 PLGRKTQ9HBL7 147 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 FAIMQ9NVQ4 179 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 EPHA6Q9UF33 1036 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 PADI4Q9UM07 663 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 SLC6A14Q9UN76 642 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 SCN3AQ9NY46 2000 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 PCDH15Q96QU1 1955 aa8.23□□□□□ -1.09
THBS3-210ENST00000541576 IGHV1OR21-1A0A087WYE8 117 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 RNF103-CHMP3A0A140T963 221 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 FUOMA2VDF0 154 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 TLCD2A6NGC4 264 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 DUX1O43812 170 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 GUCY1B2O75343 617 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 SCELO95171 688 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 OXSR1O95747 527 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 NCK1P16333 377 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF182P17025 639 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 CD97P48960 835 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CCT8P50990 548 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 NKX2-5P52952 324 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 VSX2P58304 361 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 BNIP2Q12982 314 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZC3H12BQ5HYM0 836 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 OGFRL1Q5TC84 451 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 NDUFAF5Q5TEU4 345 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 FAM180BQ6P0A1 224 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF551Q7Z340 670 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 DHFR2Q86XF0 187 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CENPSQ8N2Z9 138 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 MARVELD2Q8N4S9 558 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CSNK1A1LQ8N752 337 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 OR4C6Q8NH72 309 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CIDECQ96AQ7 238 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 TCTN2Q96GX1 697 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CD180Q99467 661 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CPPED1Q9BRF8 314 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 NLNQ9BYT8 704 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 RBM38Q9H0Z9 239 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 AP3M1Q9Y2T2 418 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 SPTBP11277 2137 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ADAMTS9Q9P2N4 1935 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 WASHC1A8K0Z3 465 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 TBX19O60806 448 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ATE1O95260 518 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 DRD2P14416 443 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 PORP16435 677 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF10P21506 573 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 GPLD1P80108 840 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 SLC14A1Q13336 389 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 DEFB110Q30KQ9 67 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 AMZ1Q400G9 498 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 DEFB134Q4QY38 66 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 MANEAQ5SRI9 462 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF362Q5T0B9 420 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 MRM1Q6IN84 353 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 SLC23A3Q6PIS1 610 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 SPPL2CQ8IUH8 684 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CLEC4FQ8N1N0 589 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 Q8N9G6 341 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 PSD4Q8NDX1 1056 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 OR4A15Q8NGL6 344 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 OR10A6Q8NH74 314 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 LZICQ8WZA0 190 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 HPS1Q92902 700 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 BTBD9Q96Q07 612 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 KLHL3Q9UH77 587 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 FBXW2Q9UKT8 454 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 MYRFQ9Y2G1 1151 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ASB4Q9Y574 426 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ARPC2O15144 300 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms