RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 B4DXG7 233 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 NEDD8-MDP1E9PL57 170 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLA2G10O15496 165 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CD72P21854 359 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MAN2A2P49641 1150 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PTPN5P54829 565 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MLLT1Q03111 559 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 GRIN2CQ14957 1233 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPR162Q16538 588 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MFSD4BQ5TF39 518 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ACSM5Q6NUN0 579 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TCTN3Q6NUS6 607 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 C11orf96Q7Z7L8 435 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CBARPQ8N350 705 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF557Q8N988 423 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC7A13Q8TCU3 470 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 C1GALT1C1Q96EU7 318 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CRELD1Q96HD1 420 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM19Q96HH6 336 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANKRA2Q9H9E1 313 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TXNL4BQ9NX01 149 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TAAR2Q9P1P5 351 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 A3GALT2U3KPV4 340 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 NPIPB8E9PQR5 432 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 H0YIV9 168 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 RNASET2O00584 256 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TPD52L2O43399 206 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRMT3O60678 531 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ARHGEF15O94989 841 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CH25HO95992 272 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 GSTM1P09488 218 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TSPAN19P0C672 248 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCNYL3P0C7X3 344 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR12D1P0DN82 309 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PSMA1P25786 263 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 RORCP51449 518 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 XKP51811 444 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 AP1S2P56377 157 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SNRPD1P62314 119 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 RBBP4Q09028 425 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CLEC12AQ5QGZ9 265 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANXA8L1Q5VT79 327 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM220Q6QAJ8 160 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PDZD3Q86UT5 571 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 NPAS4Q8IUM7 802 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CFAP206Q8IYR0 622 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM46DQ8NEK8 389 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR52P1PQ8NH57 321 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PCNPQ8WW12 178 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC7A6Q92536 515 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ARSGQ96EG1 525 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MACROD1Q9BQ69 325 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLA2G12AQ9BZM1 189 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 IL21Q9HBE4 155 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 STARD7Q9NQZ5 370 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLEKHB1Q9UF11 243 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CMAHPQ9Y471 501 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PCYT1BQ9Y5K3 369 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1W2PQ45 241 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1W2PQY0 241 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM172BPA6NC97 362 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 GLOD5A6NK44 160 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 LEFTY1O75610 366 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PSKH1P11801 424 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 NPPBP16860 134 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MYL9P24844 172 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ELAVL4P26378 380 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TIE1P35590 1138 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ETV6P41212 452 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 EIF4HQ15056 248 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SYPL1Q16563 259 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SAXO2Q658L1 398 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MED27Q6P2C8 311 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 AMER3Q8N944 861 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 KLK6Q92876 244 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMCO6Q96DC7 493 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 POLR2J3Q9H1A7 115 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 IRF2BPLQ9H1B7 796 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 EGLN3Q9H6Z9 239 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC25A19Q9HC21 320 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 B3GAT2Q9NPZ5 323 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 MIEF1Q9NQG6 463 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 ASAH2Q9NR71 780 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 CRNNQ9UBG3 495 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 PIPSLA2A3N6 862 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANTXRLA6NF34 631 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 MYL12BO14950 172 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 HRO43593 1189 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 SCO2O43819 266 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 TSC22D2O75157 780 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 LALBAP00709 142 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 CHRNB1P11230 501 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 HTR2BP41595 481 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 ASMTP46597 345 aa9.84□□□□□ -0.83
CDC42SE1-207ENST00000540998 PXNP49023 591 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms