RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 GANCQ8TET4 914 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 NTNG2Q96CW9 530 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 SNRNP40Q96DI7 357 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 SPATA17Q96L03 361 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 CNOT6LQ96LI5 555 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 PAIP2Q9BPZ3 127 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 TMEM206Q9H813 350 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 B4GALT7Q9UBV7 327 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 FBXL5Q9UKA1 691 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 ISY1Q9ULR0 285 aaKnown RBP4.48□□□□□ -1.69
YBX3-210ENST00000540975 SLC6A5Q9Y345 797 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 NCAPD3P42695 1498 aa4.48□□□□□ -1.69
YBX3-210ENST00000540975 EEA1Q15075 1411 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 HMMRO75330 724 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 ZNF253O75346 499 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 CSO75390 466 aaKnown RBP4.47□□□□□ -1.69
YBX3-210ENST00000540975 KBTBD11O94819 623 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 DUX4L4P0CJ87 422 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 OR1D2P34982 312 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 FRKP42685 505 aaPredicted RBP4.47□□□□□ -1.69
YBX3-210ENST00000540975 MAGEB1P43366 347 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 CD151P48509 253 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 ADARP55265 1226 aaKnown RBP4.47□□□□□ -1.69
YBX3-210ENST00000540975 MFGE8Q08431 387 aaPredicted RBP4.47□□□□□ -1.69
YBX3-210ENST00000540975 FHL5Q5TD97 284 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 OLFML2AQ68BL7 652 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 REP15Q6BDI9 236 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 GALNTL5Q7Z4T8 443 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 KLHDC8AQ8IYD2 350 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 SAMD12Q8N8I0 201 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 TCP11Q8WWU5 503 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 CDKN2AIPNLQ96HQ2 116 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 ZNF414Q96IQ9 312 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 SERAC1Q96JX3 654 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 TMEM161AQ9NX61 479 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 PLEK2Q9NYT0 353 aa4.47□□□□□ -1.69
YBX3-210ENST00000540975 ACEP12821 1306 aa4.46□□□□□ -1.69
YBX3-210ENST00000540975 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 FOXI3A8MTJ6 420 aaPredicted RBP4.46□□□□□ -1.7
YBX3-210ENST00000540975 GH1P01241 217 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 BRCC3P46736 316 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 SLC17A1Q14916 467 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 SPHARQ15513 63 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 LRRC38Q5VT99 294 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 BEST4Q8NFU0 473 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 OR7G3Q8NG95 312 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 SPATA18Q8TC71 538 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 LRRC2Q9BYS8 371 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 SUDS3Q9H7L9 328 aaPredicted RBP4.46□□□□□ -1.7
YBX3-210ENST00000540975 ARMCX1Q9P291 453 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 ABCD2Q9UBJ2 740 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 GTF3C4Q9UKN8 822 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 NOL7Q9UMY1 257 aaKnown RBP4.46□□□□□ -1.7
YBX3-210ENST00000540975 EXOC6BQ9Y2D4 811 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 OR1A2Q9Y585 309 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
YBX3-210ENST00000540975 FGD5Q6ZNL6 1462 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 PES1O00541 588 aaKnown RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 CSDE1O75534 798 aaKnown RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 SLC16A8O95907 504 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 PIGRP01833 764 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 GSTA2P09210 222 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 SUPT20HL2P0C7V6 817 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 C8orf89P0DMQ9 161 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 GLRA1P23415 457 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 CASQ1P31415 396 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 ALDH3B1P43353 468 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 HMGN5P82970 282 aaKnown RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 GABPAQ06546 454 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 LTB4RQ15722 352 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 ACKR1Q16570 336 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 TIMM50Q3ZCQ8 353 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 CCDC92Q53HC0 331 aaPredicted RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 UTF1Q5T230 341 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 ZNF600Q6ZNG1 722 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 PRCCQ92733 491 aaPredicted RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 CCDC47Q96A33 483 aaKnown RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 PCED1BQ96HM7 432 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 CFAP53Q96M91 514 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 RAB40CQ96S21 281 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 CCDC94Q9BW85 323 aaPredicted RBP4.45□□□□□ -1.7
YBX3-210ENST00000540975 ACPTQ9BZG2 426 aa4.45□□□□□ -1.7
YBX3-210ENST00000540975 TRAV9-2A0A087WT02 112 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 KIAA0513O60268 411 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 PDGFBP01127 241 aaPredicted RBP4.44□□□□□ -1.7
YBX3-210ENST00000540975 IGHG3P01860 377 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 CCDC159P0C7I6 412 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 RPL27P61353 136 aaKnown RBP4.44□□□□□ -1.7
YBX3-210ENST00000540975 NAAAQ02083 359 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 IFT88Q13099 833 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 C17orf58Q2M2W7 97 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 SLC22A6Q4U2R8 563 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ANKRD20A4Q4UJ75 823 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ANKRD20A8PQ5CZ79 823 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ANKRD20A2Q5SQ80 823 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ANKRD20A1Q5TYW2 823 aa4.44□□□□□ -1.7
YBX3-210ENST00000540975 ANKRD20A3Q5VUR7 823 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms