RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 AP4S1Q9Y587 144 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PCDHGB6Q9Y5F9 930 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PTGDR2Q9Y5Y4 395 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 GMEB1Q9Y692 573 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 TRBC2A0A5B9 178 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 URADA6NGE7 173 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 H0Y3Z8 333 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 RFXANKO14593 260 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ACOT8O14734 319 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 CASQ2O14958 399 aaPredicted RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 TBX19O60806 448 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ZCCHC18P0CG32 403 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 COX7A2P14406 83 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 IL1RNP18510 177 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 PKLRP30613 574 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 TIA1P31483 386 aaKnown RBP eCLIP7.93□□□□□ -1.14
CHD4-208ENST00000540960 ANXA11P50995 505 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 PGDP52209 483 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ITGA1P56199 1179 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 NME5P56597 212 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 SRP54P61011 504 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 STXBP1P61764 594 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 MC1RQ01726 317 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 LIPEQ05469 1076 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ZNF763Q0D2J5 394 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 DDX39BQ13838 428 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 CCNIQ14094 377 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 HEPACAMQ14CZ8 416 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 TAF11Q15544 211 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 RPE65Q16518 533 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 FXNQ16595 210 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 PLA2G4EQ3MJ16 856 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 LRIF1Q5T3J3 769 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ICE2Q659A1 982 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 SLC6A19Q695T7 634 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 NANOGP8Q6NSW7 305 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 NIPAL1Q6NVV3 410 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 FAM83HQ6ZRV2 1179 aaPredicted RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 SLC30A8Q8IWU4 369 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 TRIM48Q8IWZ4 208 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 PHACTR4Q8IZ21 702 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 SAMD14Q8IZD0 417 aaPredicted RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 EID3Q8N140 333 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 METTL4Q8N3J2 472 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 PACRGLQ8N7B6 248 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 RBMXL3Q8N7X1 1067 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 ARL10Q8N8L6 244 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ICA1LQ8NDH6 482 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 OR5AR1Q8NGP9 310 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 LCN9Q8WX39 176 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 NCLNQ969V3 563 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 TMEM125Q96AQ2 219 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 RGMAQ96B86 450 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 MTFMTQ96DP5 389 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 NSMCE2Q96MF7 247 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 BTBD9Q96Q07 612 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 OR4K3Q96R72 315 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 INSM2Q96T92 566 aaPredicted RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 ZNF184Q99676 751 aaPredicted RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 THUMPD3Q9BV44 507 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 SARGQ9BW04 601 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 FAIM2Q9BWQ8 316 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 OSBPL10Q9BXB5 764 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 REEP4Q9H6H4 257 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 NANOGQ9H9S0 305 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 MYNNQ9NPC7 610 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 SLC52A3Q9NQ40 469 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 BATF3Q9NR55 127 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 DLL4Q9NR61 685 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 POT1Q9NUX5 634 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 IMP3Q9NV31 184 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 ARMC1Q9NVT9 282 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 OCIAD1Q9NX40 245 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 THUMPD1Q9NXG2 353 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 SLC23A2Q9UGH3 650 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 APOBEC3BQ9UH17 382 aaKnown RBP7.93□□□□□ -1.14
CHD4-208ENST00000540960 LRCH1Q9Y2L9 728 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 PCDHA9Q9Y5H5 950 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 FER1L5A0AVI2 2057 aa7.93□□□□□ -1.14
CHD4-208ENST00000540960 ABCA4P78363 2273 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 TCRBV3S1A0A5B6 114 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 FAM221AA4D161 298 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 CDC14CA4D256 554 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 PRORSD1PA6NEY8 169 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 MAGEB17A8MXT2 336 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 RNASET2O00584 256 aaKnown RBP7.92□□□□□ -1.14
CHD4-208ENST00000540960 PCDH7O60245 1069 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 KRT75O95678 551 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 IFNA14P01570 189 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 F3P13726 295 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 CTSEP14091 401 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 SDC1P18827 310 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 XRCC1P18887 633 aaPredicted RBP7.92□□□□□ -1.14
CHD4-208ENST00000540960 GSK3BP49841 420 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 NEK2P51955 445 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 RPS15AP62244 130 aaKnown RBP7.92□□□□□ -1.14
CHD4-208ENST00000540960 SKP1P63208 163 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 REEP5Q00765 189 aa7.92□□□□□ -1.14
CHD4-208ENST00000540960 ABHD18Q0P651 414 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms