RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 WDR41Q9HAD4 459 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TNFRSF12AQ9NP84 129 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TEX10Q9NXF1 929 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 ANKRD10Q9NXR5 420 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 VTI1BQ9UEU0 232 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TNRC6AQ8NDV7 1962 aaKnown RBP8.62□□□□□ -1.03
SNHG1-215ENST00000540904 SPTA1P02549 2419 aa8.62□□□□□ -1.03
SNHG1-215ENST00000540904 TLN1Q9Y490 2541 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 TRBV11-1A0A0K0K1C0 115 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 C17orf105B2RV13 164 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 PGRMC2O15173 223 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CTIFO43310 598 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 TYROBPO43914 113 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 OR10H2O60403 315 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 GPR75O95800 540 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 MYZAPP0CAP1 466 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 COX7A2P14406 83 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 SERPINB3P29508 390 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CLCN2P51788 898 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 PLIN5Q00G26 463 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 BTKQ06187 659 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 ZNF169Q14929 603 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 INPP5JQ15735 1006 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 IMPG1Q17R60 797 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 SPDYAQ5MJ70 313 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 BEND6Q5SZJ8 279 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 NDUFAF5Q5TEU4 345 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CLEC6AQ6EIG7 209 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 OR52E8Q6IFG1 317 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 LRIG3Q6UXM1 1119 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 ZCCHC23Q6ZST2 131 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CROCCP2Q86T23 111 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 EXOC3L1Q86VI1 746 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 MMP21Q8N119 569 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 APCDD1LQ8NCL9 501 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 SUN3Q8TAQ9 357 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CPT1CQ8TCG5 803 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 THAP3Q8WTV1 239 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 PTPMT1Q8WUK0 201 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 CHTF18Q8WVB6 975 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 SREK1Q8WXA9 508 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 NCLNQ969V3 563 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 PPWD1Q96BP3 646 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 RBM18Q96H35 190 aaKnown RBP8.61□□□□□ -1.03
SNHG1-215ENST00000540904 NPAS2Q99743 824 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 TRMOQ9BU70 441 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 OR8D2Q9GZM6 311 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 ABI3Q9P2A4 366 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 FIS1Q9Y3D6 152 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
SNHG1-215ENST00000540904 ZNF462Q96JM2 2506 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 NUP210LQ5VU65 1888 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 TRAV17A0A0B4J275 112 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 GNG14A0A1W2PPG7 69 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 OR5H15A6NDH6 313 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 GABRR3A8MPY1 467 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 DYRK3O43781 588 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 PCDH7O60245 1069 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 NPHS1O60500 1241 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 GUCY1B2O75343 617 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 DDAH2O95865 285 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 CHRNGP07510 517 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 BPGMP07738 259 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 UROSP10746 265 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ALOX15P16050 662 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 CD96P40200 585 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 STT3AP46977 705 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ALDH9A1P49189 494 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 TNFSF10P50591 281 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 GPR143P51810 404 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 IGLV3-21P80748 117 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 FOXK1P85037 733 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 OC90Q02509 493 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ACSM2AQ08AH3 577 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 BIKQ13323 160 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 SPIN4Q56A73 249 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ARL13AQ5H913 290 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ACSM2BQ68CK6 577 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 NUDCD3Q8IVD9 361 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 ZNF321PQ8N8H1 164 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 MORN4Q8NDC4 146 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 C7orf57Q8NEG2 295 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 OR14A16Q8NHC5 309 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 PPP1R14CQ8TAE6 165 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 AGR3Q8TD06 166 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 SLC2A12Q8TD20 617 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 DOK4Q8TEW6 326 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 TM4SF18Q96CE8 201 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
SNHG1-215ENST00000540904 C19orf60Q96EN9 201 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 PGM2Q96G03 612 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 APIPQ96GX9 242 aa8.6□□□□□ -1.03
SNHG1-215ENST00000540904 SENP5Q96HI0 755 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms