RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 ALPPP05187 535 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 HEXBP07686 556 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF823P16415 610 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GABRB3P28472 473 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RPS19P39019 145 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 SOX3P41225 446 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SLC1A3P43003 542 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GIPRP48546 466 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 KHKP50053 298 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ACTBP60709 375 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ACTG1P63261 375 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 HMGCS1Q01581 520 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SPOCK1Q08629 439 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GPR17Q13304 367 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PTPRRQ15256 657 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 YIF1BQ5BJH7 314 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 DALRD3Q5D0E6 543 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 TMEM88Q6PEY1 159 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SLC16A13Q7RTY0 426 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GPAT4Q86UL3 456 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF680Q8NEM1 530 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF563Q8TA94 476 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ADAMTS14Q8WXS8 1223 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PTCHD1Q96NR3 888 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SPNS1Q9H2V7 528 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 LUZP4Q9P127 313 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GIMAP2Q9UG22 337 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ACSL6Q9UKU0 697 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CNTNAP4Q9C0A0 1308 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SEC14L2O76054 403 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RCBTB2O95199 551 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ALPLP05186 524 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CLEC2LP0C7M8 214 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RHCEP18577 417 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 HLA-DMAP28067 261 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CALCRP30988 508 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ETV6P41212 452 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SSR2P43308 183 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CLCN3P51790 818 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 MLLT10P55197 1068 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TSTD2Q5T7W7 516 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 KIAA0930Q6ICG6 404 aaPredicted RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 CDHR3Q6ZTQ4 885 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GALNT13Q8IUC8 556 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GID4Q8IVV7 300 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZMIZ2Q8NF64 920 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TTLQ8NG68 377 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RPL3LQ92901 407 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 MYOZ2Q9NPC6 264 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PCTPQ9UKL6 214 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ARVCFO00192 962 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ALDH2P05091 517 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CTRB1P17538 263 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 DNAJB13P59910 316 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TLE3Q04726 772 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 EIF2B1Q14232 305 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SPANXN4Q5MJ08 99 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CTRB2Q6GPI1 263 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 FAM180BQ6P0A1 224 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GLIS1Q8NBF1 620 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SLC30A7Q8NEW0 376 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 OR56B2PQ8NGI1 322 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 STYXQ8WUJ0 223 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SFXN2Q96NB2 322 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PIGQQ9BRB3 760 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ACTRT3Q9BYD9 372 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 BCO1Q9HAY6 547 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TMEM150BA6NC51 233 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 H3BSH0 61 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 LGALS8O00214 317 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SEC14L5O43304 696 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TOX4O94842 621 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RENP00797 406 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ADORA3P0DMS8 318 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CBSLP0DN79 551 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SPI1P17947 270 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ARNTP27540 789 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CBSP35520 551 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ZNF136P52737 540 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TAS2R50P59544 299 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 OR2B8PP59922 312 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 RNASE10Q5GAN6 216 aaKnown RBP8.42□□□□□ -1.06
YBX3-208ENST00000540447 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 ENPP7Q6UWV6 458 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 FAM151BQ6UXP7 276 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GRIN3AQ8TCU5 1115 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 SMARCD2Q92925 531 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 CCM2Q9BSQ5 444 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 IER2Q9BTL4 223 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 TTPALQ9BTX7 342 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 IL21RQ9HBE5 538 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 GTF2IRD1Q9UHL9 959 aa8.42□□□□□ -1.06
YBX3-208ENST00000540447 PRRG1O14668 218 aa8.41□□□□□ -1.06
YBX3-208ENST00000540447 B3GAT3O94766 335 aa8.41□□□□□ -1.06
YBX3-208ENST00000540447 C1RP00736 705 aa8.41□□□□□ -1.06
YBX3-208ENST00000540447 CD3GP09693 182 aa8.41□□□□□ -1.06
YBX3-208ENST00000540447 CDK2P24941 298 aa8.41□□□□□ -1.06
YBX3-208ENST00000540447 RPIAP49247 311 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms