RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 OR8J2Q8NGG1 315 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MR1Q95460 341 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR1F2PQ96R84 312 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DPH2Q9BQC3 489 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DUSP26Q9BV47 211 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 NRSN2Q9GZP1 204 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MKKSQ9NPJ1 570 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 LANCL2Q9NS86 450 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TAS2R7Q9NYW3 318 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 IFT80Q9P2H3 777 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF282Q9UDV7 671 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 UTS2RQ9UKP6 389 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SCN3AQ9NY46 2000 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR2W5A6NFC9 320 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 BRINP1O60477 761 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 IL6P05231 212 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 COX4I1P13073 169 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC5A2P31639 672 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 S100A3P33764 101 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KIR3DL1P43629 444 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 WNT3P56703 355 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FOXL2P58012 376 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KRT72Q14CN4 511 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RTP5Q14D33 572 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MAPRE2Q15555 327 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 C6orf15Q6UXA7 325 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR4N5Q8IXE1 308 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF595Q8IYB9 648 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RP9Q8TA86 221 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 STT3BQ8TCJ2 826 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TANKQ92844 425 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 NXPE2Q96DL1 559 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CHST8Q9H2A9 424 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ASCL3Q9NQ33 180 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PRDM9Q9NQV7 894 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MRPS33Q9Y291 106 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZFYVE26Q68DK2 2539 aa17.79■□□□□ 0.44
TNFRSF1A-213ENST00000540022 A0A1W2PS29 197 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ASPDHA6ND91 283 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CCDC154A6NI56 674 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CDRT15L2A8MXV6 281 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FGF17O60258 216 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SCN2BO60939 215 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 LDB3O75112 727 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CNOT3O75175 753 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ERAL1O75616 437 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 UBOX5O94941 541 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 C8orf89P0DMQ9 161 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 IL10P22301 178 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RBMS1P29558 406 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 BTG2P78543 158 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ID2Q02363 134 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CYLC2Q14093 348 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF750Q32MQ0 723 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MLIPQ5VWP3 458 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM198BQ6UWH4 519 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TMEM151BQ8IW70 566 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TSPEARQ8WU66 669 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CIDECQ96AQ7 238 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ANKRD9Q96BM1 317 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KLHL29Q96CT2 875 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CNRIP1Q96F85 164 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR52E6Q96RD3 313 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC25A23Q9BV35 468 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 BHLHE41Q9C0J9 482 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TGIF2Q9GZN2 237 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC35C2Q9NQQ7 365 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PRTFDC1Q9NRG1 225 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PCDHGA7Q9Y5G6 932 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 AK5Q9Y6K8 562 aa17.78■□□□□ 0.44
TNFRSF1A-213ENST00000540022 A0A1W2PP18 115 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FBP2O00757 339 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CLDN4O14493 209 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CBX6O95503 412 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 EFNA1P20827 205 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PRDX6P30041 224 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 EFNA3P52797 238 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FOLH1Q04609 750 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OCA2Q04671 838 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TLR1Q15399 786 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 NKG7Q16617 165 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MRPL14Q6P1L8 145 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 IGF2-ASQ6U949 168 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 LAPTM4BQ86VI4 370 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PRSS58Q8IYP2 241 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FKBP10Q96AY3 582 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CMTM5Q96DZ9 223 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF681Q96N22 645 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC26A1Q9H2B4 701 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLAMF7Q9NQ25 335 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ATAD3AQ9NVI7 634 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PSME2Q9UL46 239 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PADI1Q9ULC6 663 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RAXQ9Y2V3 346 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CLDN16Q9Y5I7 305 aa17.77■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MYOCOSA0A1B0GUC4 107 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DYTNA2CJ06 578 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 BLACEA4D250 179 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 VSTM2BA6NLU5 285 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms