RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 BTAF1O14981 1849 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 PHIPQ8WWQ0 1821 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 A0A1B0GVT2 93 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ISPDA4D126 451 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GJE1A6NN92 205 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 STATHP02808 62 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ETV3P41162 512 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 CDH15P55291 814 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 TPTEP56180 551 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 PSMA6P60900 246 aaKnown RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 CLDN10P78369 228 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF181Q2M3W8 571 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 UAP1L1Q3KQV9 507 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 LRIT3Q3SXY7 679 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 TMPPEQ6ZT21 453 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 LNX2Q8N448 690 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 WDTC1Q8N5D0 677 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 TOR1AIP2Q8NFQ8 470 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 IGSF8Q969P0 613 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 DMRTB1Q96MA1 342 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HERPUD2Q9BSE4 406 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF471Q9BX82 626 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 BCAS3Q9H6U6 928 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF395Q9H8N7 513 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 NKX1-2Q9UD57 310 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 KCNN3Q9UGI6 736 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 SH2B3Q9UQQ2 575 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 KCNIP3Q9Y2W7 256 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 TIAM2Q8IVF5 1701 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 UNC119BA6NIH7 251 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ZSCAN5BA6NJL1 495 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ERCC1P07992 297 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HBQ1P09105 142 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GSTM2P28161 218 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 SFT2D3Q587I9 215 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 COQ5Q5HYK3 327 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 CDKL4Q5MAI5 379 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 C15orf39Q6ZRI6 1047 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 SLC15A3Q8IY34 581 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 ENDOVQ8N8Q3 282 aaKnown RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 FIBINQ8TAL6 211 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 SLC22A8Q8TCC7 542 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 L3HYPDHQ96EM0 354 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 WDR77Q9BQA1 342 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 WDR6Q9NNW5 1121 aaKnown RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 TMPRSS11EQ9UL52 423 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GPR34Q9UPC5 381 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 DNMT3AQ9Y6K1 912 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HTRA2O43464 458 aaPredicted RBP6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HCRTR2O43614 444 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HRGP04196 525 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 CCNOP22674 350 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 NTSR1P30989 418 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 LCN1P31025 176 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 KCNJ5P48544 419 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 RPA4Q13156 261 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GINS1Q14691 196 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 DEFB119Q8N690 84 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 HOXD1Q9GZZ0 328 aa6.22□□□□□ -1.41
LSAMP-207ENST00000539563 GLOD5A6NK44 160 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 HSPA12AO43301 675 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SPARCP09486 303 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 BCKDHAP12694 445 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 HNRNPKP61978 463 aaKnown RBP eCLIP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 RPL6Q02878 288 aaKnown RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 HYAL2Q12891 473 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 PPP1R3AQ16821 1122 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 CCSAPQ6IQ19 270 aaPredicted RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 ARHGAP11AQ6P4F7 1023 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SLC39A5Q6ZMH5 540 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 RTL10Q7L3V2 364 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SNX29P2Q8IUI4 249 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SUN5Q8TC36 379 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 RFT1Q96AA3 541 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 BMFQ96LC9 184 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 PTCHD1Q96NR3 888 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 ATG5Q9H1Y0 275 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 AIG1Q9NVV5 245 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM45AQ9NWC5 275 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 MAGED1Q9Y5V3 778 aaPredicted RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 H3BUI4 141 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 M0R129 80 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SCAMP2O15127 329 aaKnown RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 BPNT1O95861 308 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 JUNDP17535 347 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 PGCP20142 388 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 RPS3AP61247 264 aaKnown RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 GALNT1Q10472 559 aaPredicted RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 CCINQ13939 588 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 GK3PQ14409 553 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 CST6Q15828 149 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 UGT3A2Q3SY77 523 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SYCE2Q6PIF2 218 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 FTMTQ8N4E7 242 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF709Q8N972 641 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 OR6N2Q8NGY6 317 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 FUZQ9BT04 418 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 NPLQ9BXD5 320 aaPredicted RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms