RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 EPHA5P54756 1037 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 PRKCDQ05655 676 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 TBCEQ15813 527 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ZNF284Q2VY69 593 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 TMPRSS11AQ6ZMR5 421 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ZNF547Q8IVP9 402 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 LRRC56Q8IYG6 542 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 IQCF1Q8N6M8 205 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 AQP11Q8NBQ7 271 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 POP5Q969H6 163 aaKnown RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 COL21A1Q96P44 957 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 FAM129BQ96TA1 746 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 DOHHQ9BU89 302 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SORBS1Q9BX66 1292 aaKnown RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 OR2B2Q9GZK3 357 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SMURF1Q9HCE7 757 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 NFKBIL1Q9UBC1 381 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 PCDHGB3Q9Y5G1 929 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 HSPE1-MOB4S4R3N1 261 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 MGAT4DA6NG13 374 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ENTPD6O75354 484 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 CDRT1O95170 752 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 GASTP01350 101 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 HSD3B1P14060 373 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 HSD3B2P26439 372 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 PCGF2P35227 344 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 UGT2B10P36537 528 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SELENOWP63302 87 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 CDK10Q15131 360 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 PLPP4Q5VZY2 271 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SHFQ7M4L6 423 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 CCDC190Q86UF4 302 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SFTPA1Q8IWL2 248 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 SYT14Q8NB59 555 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ASB15Q8WXK1 588 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ING5Q8WYH8 240 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 TIFAQ96CG3 184 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 OTUB1Q96FW1 271 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 EPYCQ99645 322 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 RSPO3Q9BXY4 272 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 CARD8Q9Y2G2 431 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 PADI2Q9Y2J8 665 aa11.97□□□□□ -0.49
SFSWAP-208ENST00000539506 ZSCAN5BA6NJL1 495 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 H3BN98 237 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 RNASET2O00584 256 aaKnown RBP11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 TMCC2O75069 709 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 SCO1O75880 301 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 CLTBP09497 229 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 IL7P13232 177 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 PTNP21246 168 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 SOAT1P35610 550 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 SLBPQ14493 270 aaKnown RBP eCLIP11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 STARD3Q14849 445 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 ZNF79Q15937 498 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 SPIN4Q56A73 249 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 RPS26P11Q5JNZ5 115 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 OR7G1Q8NGA0 311 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 BCL7BQ9BQE9 202 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 OR2AG1Q9H205 316 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 PCDHGA2Q9Y5H1 932 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 KCNE2Q9Y6J6 123 aa11.96□□□□□ -0.49
SFSWAP-208ENST00000539506 PRAMEF33A0A0G2JMD5 474 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A1B0GVC2 190 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 A6NIN4 97 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 PRAMEF10O60809 474 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 SLITRK5O94991 958 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 CYP17A1P05093 508 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 CISD3P0C7P0 127 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 CCNYL3P0C7X3 344 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 PTPN2P17706 415 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 PTGER1P34995 402 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 IRS1P35568 1242 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 ASMTP46597 345 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 PRIM2P49643 509 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 PRMT2P55345 433 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 GPR50Q13585 617 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 SPDYE7PQ495Y7 208 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF697Q5TEC3 545 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 COQ10AQ96MF6 247 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 GABARAPL3Q9BY60 117 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 C11orf54Q9H0W9 315 aaPredicted RBP11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 CCDC177Q9NQR7 707 aaPredicted RBP11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 ATP6V1HQ9UI12 483 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 LRRK1Q38SD2 2015 aa11.96□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A0X1KG70 313 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 FAM172BPA6NC97 362 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 FURINP09958 794 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ARPC4P59998 168 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TAP2Q03519 686 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 EEF1A2Q05639 463 aaKnown RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PYDC2Q56P42 97 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 C22orf42Q6IC83 251 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 B3GLCTQ6Y288 498 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 VN1R5Q7Z5H4 357 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF557Q8N988 423 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 OR4C15Q8NGM1 316 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms