RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SLC7A2P52569 658 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 TAS2R50P59544 299 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 PLIN5Q00G26 463 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 CEACAM7Q14002 265 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 PIGGQ5H8A4 983 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 CCNYL2Q5T2Q4 361 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 OR4F3Q6IEY1 312 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 MRM1Q6IN84 353 aaKnown RBP16.23■□□□□ 0.19
CLN6-202ENST00000538696 FAM71E1Q6IPT2 247 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 FAM199XQ6PEV8 388 aaPredicted RBP16.23■□□□□ 0.19
CLN6-202ENST00000538696 PAGE2Q7Z2X7 111 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 HPS6Q86YV9 775 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 NLGN4XQ8N0W4 816 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 FBXW8Q8N3Y1 598 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 ESX1Q8N693 406 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 NLGN4YQ8NFZ3 816 aaPredicted RBP16.23■□□□□ 0.19
CLN6-202ENST00000538696 WDR60Q8WVS4 1066 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 GTF2H4Q92759 462 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 OR52E6Q96RD3 313 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 DPH2Q9BQC3 489 aaPredicted RBP16.23■□□□□ 0.19
CLN6-202ENST00000538696 ADA2Q9NZK5 511 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 GMPR2Q9P2T1 348 aaKnown RBP16.23■□□□□ 0.19
CLN6-202ENST00000538696 DAPP1Q9UN19 280 aa16.23■□□□□ 0.19
CLN6-202ENST00000538696 CNOT3O75175 753 aaKnown RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 PIM1P11309 404 aaPredicted RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 KIR3DL1P43629 444 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 LIM2P55344 173 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 WNT3P56703 355 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 RAB38P57729 211 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 MC1RQ01726 317 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 C2orf80Q0P641 193 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 SLAMF1Q13291 335 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 KPNB1Q14974 876 aaKnown RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 ZNF385BQ569K4 471 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 FBXW10Q5XX13 1052 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 DLEU7Q6UYE1 221 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 DTX1Q86Y01 620 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 C10orf67Q8IYJ2 551 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 MMP21Q8N119 569 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 RNF148Q8N7C7 305 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 OR51Q1Q8NH59 317 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 CT55Q8WUE5 264 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 STARD8Q92502 1023 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 FKBP10Q96AY3 582 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 CCDC124Q96CT7 223 aaKnown RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 CSF3RQ99062 836 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 MAPKAP1Q9BPZ7 522 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 RBCK1Q9BYM8 510 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 TRIM8Q9BZR9 551 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 REEP4Q9H6H4 257 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 CLK4Q9HAZ1 481 aaKnown RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 LYRM4Q9HD34 91 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 LYARQ9NX58 379 aaKnown RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 CMTM6Q9NX76 183 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 KCMF1Q9P0J7 381 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 TMEM181Q9P2C4 612 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 IFT80Q9P2H3 777 aaPredicted RBP16.22■□□□□ 0.19
CLN6-202ENST00000538696 CTSFQ9UBX1 484 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 ATP6V1HQ9UI12 483 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 ANGPTL2Q9UKU9 493 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 MAP4K5Q9Y4K4 846 aa16.22■□□□□ 0.19
CLN6-202ENST00000538696 IGLV3-12A0A075B6K2 115 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 ARHGAP10A1A4S6 786 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 GABRR3A8MPY1 467 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 FAM58BPP0C7Q3 252 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 CCNYL3P0C7X3 344 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 LIPCP11150 499 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 LAMP1P11279 417 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 SLC6A2P23975 617 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 MAPK12P53778 367 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 SRSF11Q05519 484 aaKnown RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 MAPKAPK3Q16644 382 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 DPY19L1Q2PZI1 675 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 GTDC1Q4AE62 458 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 C6orf10Q5SRN2 563 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 MRPL14Q6P1L8 145 aaKnown RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 DNAJC14Q6Y2X3 702 aaPredicted RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 MSANTD1Q6ZTZ1 278 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 NET1Q7Z628 596 aaPredicted RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 ANKRD46Q86W74 232 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 ZC3H7AQ8IWR0 971 aaKnown RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 GATA6Q92908 595 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 NKD1Q969G9 470 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 PEX11GQ96HA9 241 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 HOPXQ9BPY8 73 aaPredicted RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 INPP5KQ9BT40 448 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 TMEM121BQ9BXQ6 578 aaPredicted RBP16.21■□□□□ 0.19
CLN6-202ENST00000538696 SPAG4Q9NPE6 437 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 SERHLQ9NQF3 203 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 ABCD2Q9UBJ2 740 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 TRPC4Q9UBN4 977 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 FBXW2Q9UKT8 454 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 PADI1Q9ULC6 663 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 MAPRE3Q9UPY8 281 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 MAN2B2Q9Y2E5 1009 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 ASB4Q9Y574 426 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 AKAP13Q12802 2813 aa16.21■□□□□ 0.19
CLN6-202ENST00000538696 NME4O00746 187 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 TERTO14746 1132 aaKnown RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 MGRN1O60291 552 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms