RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 COL9A1P20849 921 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 SSR2P43308 183 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 LIM2P55344 173 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 CSNK2BP67870 215 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 RPE65Q16518 533 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 MLIPQ5VWP3 458 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 FBXL6Q8N531 539 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 IL17RCQ8NAC3 791 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 RAB8BQ92930 207 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 SARGQ9BW04 601 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 C1QTNF7Q9BXJ2 289 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 ACOT13Q9NPJ3 140 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 EHD3Q9NZN3 535 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 MOSPD1Q9UJG1 213 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
LIMK1-208ENST00000538333 ARRDC5A6NEK1 342 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 FFAR1O14842 300 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 HAT1O14929 419 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 GADD45GO95257 159 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 GABRB1P18505 474 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CD72P21854 359 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CBLP22681 906 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 NR4A1P22736 598 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 GSSP48637 474 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CCT3P49368 545 aaKnown RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MLLT10P55197 1068 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PPP2CBP62714 309 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PPP2CAP67775 309 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MVKQ03426 396 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 GANABQ14697 944 aaKnown RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MRM1Q6IN84 353 aaKnown RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CROCCP3Q8IVE0 287 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CCDC103Q8IW40 242 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 RHOXF1Q8NHV9 184 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 AMDHD1Q96NU7 426 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 BCL7BQ9BQE9 202 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 GLIPR2Q9H4G4 154 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SYNPO2LQ9H987 977 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PREBQ9HCU5 417 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SPHK1Q9NYA1 384 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 LMCD1Q9NZU5 365 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CLEC1BQ9P126 229 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 HCN4Q9Y3Q4 1203 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3DA0A087WVF3 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3IA0A087WXS9 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3EA0A087X179 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3FA6NER0 549 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 WASHC1A8K0Z3 465 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3LB9A6J9 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 C5orf58C9J3I9 102 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 CACNB4O00305 520 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SEMA7AO75326 666 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 FADS2O95864 444 aaKnown RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 STATHP02808 62 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3HP0C7X1 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 ABATP80404 500 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 KRT33BQ14525 404 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SPDYE7PQ495Y7 208 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3GQ6DHY5 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3CQ6IPX1 549 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF770Q6IQ21 691 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 WASH2PQ6VEQ5 465 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 AHSA2Q719I0 299 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D3Q8IZP1 549 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PARP8Q8N3A8 854 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SVOPQ8N4V2 548 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 FAM81AQ8TBF8 368 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 MACROD1Q9BQ69 325 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 PRDM7Q9NQW5 492 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 FAM32AQ9Y421 112 aaKnown RBP13.28□□□□□ -0.28
LIMK1-208ENST00000538333 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
LIMK1-208ENST00000538333 A0A0J9YVX5 310 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 PRSS38A1L453 326 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 POM121BA6NF01 834 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 SCAMP1O15126 338 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 SLC31A1O15431 190 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 PRKRAO75569 313 aaKnown RBP13.27□□□□□ -0.28
LIMK1-208ENST00000538333 GRK3P35626 688 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 AHRP35869 848 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 TP53BP2Q13625 1128 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 MOGQ16653 247 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 KLHL35Q6PF15 583 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 P3H2Q8IVL5 708 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 FKBP14Q9NWM8 211 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF226Q9NYT6 803 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 PSORS1C1Q9UIG5 152 aa13.27□□□□□ -0.28
LIMK1-208ENST00000538333 PNMA8BQ9ULN7 279 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-208ENST00000538333 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms