RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NXPE3Q969Y0 559 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 LRRC3BQ96PB8 259 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 OPALINQ96PE5 141 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 SLC25A19Q9HC21 320 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 GPR34Q9UPC5 381 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 CFL2Q9Y281 166 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 PCDHGB6Q9Y5F9 930 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 GPC6Q9Y625 555 aaPredicted RBP13.61□□□□□ -0.23
USP44-203ENST00000537435 ALPK3Q96L96 1907 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 SNPHO15079 494 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 B4GALT2O60909 372 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 GPX5O75715 221 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 PTTG1O95997 202 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 OPRD1P41143 372 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 SPDYE7PQ495Y7 208 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 DEF8Q6ZN54 512 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 C6orf120Q7Z4R8 191 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 GRASPQ7Z6J2 395 aaPredicted RBP13.61□□□□□ -0.23
USP44-203ENST00000537435 C17orf64Q86WR6 236 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 PPP1R16AQ96I34 528 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 TAPBPLQ9BX59 468 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 MS4A8Q9BY19 250 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 CUEDC1Q9NWM3 386 aaPredicted RBP13.61□□□□□ -0.23
USP44-203ENST00000537435 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
USP44-203ENST00000537435 FEZF1A0PJY2 475 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 PRRT4C9JH25 899 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 H3BN98 237 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 SLC9A3R1O14745 358 aaPredicted RBP13.6□□□□□ -0.23
USP44-203ENST00000537435 EFCAB14O75071 495 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 SEMA3DO95025 777 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 CKMT1AP12532 417 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 ADRB3P13945 408 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 BSGP35613 385 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 DPTQ07507 201 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 ILKQ13418 452 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 HEPACAMQ14CZ8 416 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 SPANXN2Q5MJ10 180 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 DCUN1D3Q8IWE4 304 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 MRPL43Q8N983 215 aaKnown RBP13.6□□□□□ -0.23
USP44-203ENST00000537435 OR4D11Q8NGI4 311 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 TFGQ92734 400 aaPredicted RBP13.6□□□□□ -0.23
USP44-203ENST00000537435 EXOSC8Q96B26 276 aaKnown RBP13.6□□□□□ -0.23
USP44-203ENST00000537435 WFDC6Q9BQY6 131 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 NEUROD4Q9HD90 331 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 FZD3Q9NPG1 666 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
USP44-203ENST00000537435 MKLN1Q9UL63 735 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 MGAT4BQ9UQ53 548 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 IRAK3Q9Y616 596 aa13.6□□□□□ -0.23
USP44-203ENST00000537435 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 HMGN4O00479 90 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 CTDSP2O14595 271 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 CAPN5O15484 640 aaPredicted RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 VEGFDO43915 354 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 PDE9AO76083 593 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 H1F0P07305 194 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 CEBPBP17676 345 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SNRPGP62308 76 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 FNDC3BQ53EP0 1204 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 C9orf64Q5T6V5 341 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 ZNF697Q5TEC3 545 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 C1orf53Q5VUE5 145 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SLX4IPQ5VYV7 408 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 WDR53Q7Z5U6 358 aaPredicted RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 CACTIN-AS1Q8N1I8 211 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 OR8D1Q8WZ84 308 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 TXNDC15Q96J42 360 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 TRNT1Q96Q11 434 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 AIF1LQ9BQI0 150 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 CNPPD1Q9BV87 410 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 RHBGQ9H310 441 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 HHATLQ9HCP6 504 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SNX11Q9Y5W9 270 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 FAAHO00519 579 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 TBX19O60806 448 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 OXSR1O95747 527 aaPredicted RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 SCG5P05408 212 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 ETV6P41212 452 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 KCNJ5P48544 419 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 XKP51811 444 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 PCBP4P57723 403 aaKnown RBP13.59□□□□□ -0.23
USP44-203ENST00000537435 RHAGQ02094 409 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 KCNJ8Q15842 424 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 FAM92BQ6ZTR7 304 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 CCDC190Q86UF4 302 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SLC34A3Q8N130 599 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 PLA2G15Q8NCC3 412 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SMPDL3AQ92484 453 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 ZNF354BQ96LW1 612 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
USP44-203ENST00000537435 SLC23A2Q9UGH3 650 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms