RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PRRX2Q99811 253 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PELOQ9BRX2 385 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 TMEM43Q9BTV4 400 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SNRNP25Q9BV90 132 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MND1Q9BWT6 205 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 B3GNT5Q9BYG0 378 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZCCHC2Q9C0B9 1178 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 HDHD2Q9H0R4 259 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MTIF3Q9H2K0 278 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR51M1Q9H341 326 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TMEM231Q9H6L2 316 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RC3H2Q9HBD1 1191 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 SEMA4BQ9NPR2 832 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 TMEM184CQ9NVA4 438 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 VAPAQ9P0L0 249 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 POLG2Q9UHN1 485 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SSR3Q9UNL2 185 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TRAPPC4Q9Y296 219 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PCDHB7Q9Y5E2 793 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CSNK1G3Q9Y6M4 447 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SESN1Q9Y6P5 492 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PLIN4Q96Q06 1357 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 IGLV3-22A0A075B6J6 115 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FAM95CA0A1B0GW59 222 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FAM86C2PA6NEL3 165 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DCLK1O15075 740 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR2T1O43869 369 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PRPSAP2O60256 369 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SPDEFO95238 335 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 JCHAINP01591 159 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 HPXP02790 462 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 S100A9P06702 114 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 GP1BAP07359 652 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PRF1P14222 555 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GOT1P17174 413 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CD72P21854 359 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 UBA1P22314 1058 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 S100A7P31151 101 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TNFSF9P41273 254 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ACTR1BP42025 376 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PIK3CGP48736 1102 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 INPP1P49441 399 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RABGGTBP53611 331 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZP1P60852 638 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PPIGQ13427 754 aaKnown RBP eCLIP3.56□□□□□ -1.84
MCF2-210ENST00000536274 GK2Q14410 553 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 CHRNA6Q15825 494 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TAZQ16635 292 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ST3GAL2Q16842 350 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NHLRC3Q5JS37 347 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PCID2Q5JVF3 399 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DGKKQ5KSL6 1271 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 HECTD3Q5T447 861 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR6B2Q6IFH4 312 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZPBP2Q6X784 338 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PID1Q7Z2X4 250 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 WDR53Q7Z5U6 358 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 XYLT1Q86Y38 959 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PUSL1Q8N0Z8 303 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 CRYBG2Q8N1P7 616 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 LPCAT1Q8NF37 534 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GPR152Q8TDT2 470 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GBF1Q92538 1859 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NDRG1Q92597 394 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 KIAA1191Q96A73 305 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MRPL38Q96DV4 380 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 SCRN2Q96FV2 425 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PAWRQ96IZ0 340 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 C12orf66Q96MD2 445 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZNF583Q96ND8 569 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TGM7Q96PF1 710 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DEFB118Q96PH6 123 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SSX3Q99909 188 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ADPGKQ9BRR6 497 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ARHGAP9Q9BRR9 750 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GSTO2Q9H4Y5 243 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TFB2MQ9H5Q4 396 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 CISHQ9NSE2 258 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RLIMQ9NVW2 624 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RBFOX1Q9NWB1 397 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 MS4A12Q9NXJ0 267 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 KIF17Q9P2E2 1029 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ARHGAP28Q9P2N2 729 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NDRG4Q9ULP0 352 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 ADAMTS5Q9UNA0 930 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 WASF3Q9UPY6 502 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PCDHB9Q9Y5E1 797 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 A0A087X1B8 175 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ABHD14A-ACY1A0A1B0GW23 586 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PQLC2LA1A4F0 135 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 C2orf74A8MZ97 194 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SLCO1B7G3V0H7 640 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LCE2BO14633 110 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ABCD4O14678 606 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SMAD9O15198 467 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 RRP8O43159 456 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 SEPT4O43236 478 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 PSMD10O75832 226 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms