RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CFL2Q9Y281 166 aa15.24■□□□□ 0.03
CHMP1A-202ENST00000535997 SNX4O95219 450 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 RPN2P04844 631 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ETV6P41212 452 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 GSTM5P46439 218 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 RPS26P62854 115 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 SLC13A2Q13183 592 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 KRR1Q13601 381 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 FNDC3BQ53EP0 1204 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ATCAYQ86WG3 371 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 CYP4Z2PQ8N1L4 340 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ANKRD53Q8N9V6 530 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 GPR32P1Q8NGA4 272 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 HPS1Q92902 700 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 NXPE3Q969Y0 559 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ZNF764Q96H86 408 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TEFMQ96QE5 360 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 PITHD1Q9GZP4 211 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 PCBD2Q9H0N5 130 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 WASH6PQ9NQA3 447 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 QPCTLQ9NXS2 382 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TAC3Q9UHF0 121 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 PLAGL1Q9UM63 463 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TLR4O00206 839 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 RTCAO00442 366 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 FAAHO00519 579 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 KIAA0513O60268 411 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 CCR8P51685 355 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 SMIM11AP58511 58 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 RHAGQ02094 409 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 NCF4Q15080 339 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 RPS26P11Q5JNZ5 115 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 MEDAGQ5VYS4 303 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ETFBKMTQ8IXQ9 262 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 POC5Q8NA72 575 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 OR5K2Q8NHB8 316 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ING5Q8WYH8 240 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ZBED6CLQ96FA7 236 aaPredicted RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 COX14Q96I36 57 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 DHRS1Q96LJ7 313 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ZNF354BQ96LW1 612 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 ZNF607Q96SK3 696 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 NT5DC2Q9H857 520 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 DYRK4Q9NR20 520 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TAS2R16Q9NYV7 291 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 TMEM98Q9Y2Y6 226 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 PRKAB1Q9Y478 270 aa15.23■□□□□ 0.03
CHMP1A-202ENST00000535997 KIAA1549LQ6ZVL6 1849 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 HMGN4O00479 90 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SH3BP5O60239 455 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SEMA7AO75326 666 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ENTPD6O75354 484 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 PTTG1O95997 202 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 CEBPBP17676 345 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 KCNJ5P48544 419 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 LEXMQ3ZCV2 418 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SMPDL3AQ92484 453 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 TAPBPLQ9BX59 468 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ABCG4Q9H172 646 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 PLXND1Q9Y4D7 1925 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 KIF26AQ9ULI4 1882 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 HAT1O14929 419 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 OR10H3O60404 316 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SCG5P05408 212 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 H1F0P07305 194 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ADRA2AP08913 450 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ELAVL4P26378 380 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SEPHS1P49903 392 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 TSTQ16762 297 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SPDYE7PQ495Y7 208 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SPANXN2Q5MJ10 180 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 TMEM201Q5SNT2 666 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SLX4IPQ5VYV7 408 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 METRNLQ641Q3 311 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ADAMTSL4Q6UY14 1074 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 NCCRP1Q6ZVX7 275 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 POF1BQ8WVV4 589 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 KLHL6Q8WZ60 621 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 RAB8BQ92930 207 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 RGMAQ96B86 450 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 IL4I1Q96RQ9 567 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 RSPO3Q9BXY4 272 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 RACGAP1Q9H0H5 632 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 SIRT3Q9NTG7 399 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ACSS1Q9NUB1 689 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 TAS2R7Q9NYW3 318 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 ACAD8Q9UKU7 415 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 PCYT1BQ9Y5K3 369 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 PTPRSQ13332 1948 aa15.22■□□□□ 0.03
CHMP1A-202ENST00000535997 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
CHMP1A-202ENST00000535997 EPCAMP16422 314 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms