RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MRPL43Q8N983 215 aaKnown RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 OR10Q1Q8NGQ4 319 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 CDC26Q8NHZ8 85 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 LHFPL5Q8TAF8 219 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 FCGR1BQ92637 280 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 TM9SF2Q99805 663 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 KRT84Q9NSB2 600 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 PADI2Q9Y2J8 665 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 DYRK1BQ9Y463 629 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 CCDC182A6NF36 153 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 WBP4O75554 376 aaKnown RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 C1orf105O95561 183 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 MYL9P24844 172 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 SOX6P35712 828 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 PREPP48147 710 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ST8SIA6P61647 398 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 KIAA1614Q5VZ46 1190 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 FAHD1Q6P587 224 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 SLC23A1Q9UHI7 598 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 MTCL1Q9Y4B5 1905 aaKnown RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 GNG14A0A1W2PPG7 69 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 A0A1W2PQ09 198 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF250P15622 560 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 CSTF2P33240 577 aaKnown RBP eCLIP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 TIE1P35590 1138 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 BDKRB1P46663 353 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 SOX9P48436 509 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 DAB2P98082 770 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 RBBP4Q09028 425 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 HYAL2Q12891 473 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ARMCX4Q5H9R4 360 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF765Q7L2R6 523 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 CCDC71Q8IV32 467 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 DNASE1L2Q92874 299 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF514Q96K75 400 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 DOHHQ9BU89 302 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 REEP4Q9H6H4 257 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 PRM3Q9NNZ6 103 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 FAM8A1Q9UBU6 413 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 PCDH7O60245 1069 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 PRNPP04156 253 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 HKDC1Q2TB90 917 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 LAMTOR1Q6IAA8 161 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 VTCN1Q7Z7D3 282 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 ATG16L2Q8NAA4 619 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 LILRB1Q8NHL6 650 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-203ENST00000535977 DTD2Q96FN9 168 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 C7orf34Q96L11 122 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 PITX2Q99697 317 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 COPS4Q9BT78 406 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 LIN7BQ9HAP6 207 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 THUMPD1Q9NXG2 353 aaKnown RBP17.11■□□□□ 0.33
RAB40C-203ENST00000535977 HSPB11Q9Y547 144 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 PLD2O14939 933 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 YY2O15391 372 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 ALPPP05187 535 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 HNRNPA1P09651 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB40C-203ENST00000535977 C1GALT1C1LP0DN25 315 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF763Q0D2J5 394 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 PROX2Q3B8N5 592 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF658BQ4V348 819 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-203ENST00000535977 LAS2Q8IYD9 372 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 OR4A15Q8NGL6 344 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 NEIL2Q969S2 332 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 UBE2E3Q969T4 207 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 TRMT61AQ96FX7 289 aaKnown RBP17.11■□□□□ 0.33
RAB40C-203ENST00000535977 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 SH3BP4Q9P0V3 963 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 INSL6Q9Y581 213 aa17.11■□□□□ 0.33
RAB40C-203ENST00000535977 ETHE1O95571 254 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 CFL1P23528 166 aaKnown RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 DGKGP49619 791 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 LIMK1P53667 647 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 RPS13P62277 151 aaKnown RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 KCNJ10P78508 379 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 ELP6Q0PNE2 266 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 PDE12Q6L8Q7 609 aaKnown RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 TMEM65Q6PI78 240 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 XKRXQ6PP77 449 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 APH1BQ8WW43 257 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SORCS1Q8WY21 1168 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 MTERF3Q96E29 417 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SGPP1Q9BX95 441 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SNX7Q9UNH6 387 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 LAMA2P24043 3122 aaKnown RBP17.1■□□□□ 0.33
RAB40C-203ENST00000535977 C17orf113A0A1B0GUU1 675 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 B4DXG7 233 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SMLR1H3BR10 107 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 I3L521 148 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 TSPAN4O14817 238 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 BET1O15155 118 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 ADAMDEC1O15204 470 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 PCDHGA12O60330 932 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 CSF2P04141 144 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms