RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 DSG4Q86SJ6 1040 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 AMIGO1Q86WK6 493 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 OR1J1Q8NGS3 322 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 OR2AJ1Q8NGZ0 328 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 SPPL2BQ8TCT7 592 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 CRYGNQ8WXF5 182 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 IRGQQ8WZA9 623 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 SYN2Q92777 582 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 OTUB2Q96DC9 234 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 THOC1Q96FV9 657 aaKnown RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 PGM2Q96G03 612 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 CPB2Q96IY4 423 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 IFT74Q96LB3 600 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 LGMNQ99538 433 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 RHNO1Q9BSD3 238 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 URM1Q9BTM9 101 aaKnown RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 TRAF4Q9BUZ4 470 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 VN1R1Q9GZP7 353 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 FN3KQ9H479 309 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 SLA2Q9H6Q3 261 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 TMEM206Q9H813 350 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 MINDY3Q9H8M7 445 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 CNOT10Q9H9A5 744 aaKnown RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 XAB2Q9HCS7 855 aaKnown RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 SH3GLB2Q9NR46 395 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 VPS18Q9P253 973 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 ANKMY1Q9P2S6 941 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 FBXL5Q9UKA1 691 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 HES2Q9Y543 173 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 RPS6KL1Q9Y6S9 549 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 SPTAN1Q13813 2472 aaKnown RBP3.01□□□□□ -1.93
SNHG1-202ENST00000535689 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
SNHG1-202ENST00000535689 GIMAP1-GIMAP5A0A087WTJ2 511 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 TRAV19A0A0A6YYK7 116 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 A0A1W2PPQ1 181 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 LRRIQ4A6NIV6 560 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 C2orf81A6NN90 581 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 K7ERI5 159 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 YKT6O15498 198 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 ADAM12O43184 909 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 ZNF500O60304 480 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 SYNCRIPO60506 623 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 MAGEC1O60732 1142 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 LDOC1O95751 146 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 RPN1P04843 607 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 GCFC2P16383 781 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 EPORP19235 508 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 TYMPP19971 482 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 EFNA1P20827 205 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 CSTF2P33240 577 aaKnown RBP eCLIP3□□□□□ -1.93
SNHG1-202ENST00000535689 ARL2P36404 184 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 GP5P40197 560 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 PTGER3P43115 390 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 LHX1P48742 406 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CDH11P55287 796 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 MAZP56270 477 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 RPL10AP62906 217 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 POU5F1Q01860 360 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 ILF2Q12905 390 aaKnown RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 SGCGQ13326 291 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 PPP2R5CQ13362 524 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 EMC2Q15006 297 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 HYAL4Q2M3T9 481 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 VWC2Q2TAL6 325 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 ODF2Q5BJF6 829 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 RUSC1-AS1Q66K80 236 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CENPPQ6IPU0 288 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CEACAM20Q6UY09 585 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CCDC83Q8IWF9 413 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CD302Q8IX05 232 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CDK20Q8IZL9 346 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 STPG4Q8N801 248 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 TRIML1Q8N9V2 468 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 SLC24A4Q8NFF2 622 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 OR10V1Q8NGI7 309 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 OR5M8Q8NGP6 311 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 OR13C3Q8NGS6 347 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 PHLDA1Q8WV24 401 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 DNASE2BQ8WZ79 361 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 EXT2Q93063 718 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 GIMAP5Q96F15 307 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 NAA11Q9BSU3 229 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 NUP58Q9BVL2 599 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CSTL1Q9H114 145 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 RWDD1Q9H446 243 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 FZD8Q9H461 694 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 GOLPH3LQ9H4A5 285 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 CDH20Q9HBT6 801 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 GSN-AS1Q9NRJ2 163 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 C2orf42Q9NWW7 574 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 DONSONQ9NYP3 566 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 RHCGQ9UBD6 479 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 LEF1Q9UJU2 399 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 C2CD2Q9Y426 696 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 ANK1P16157 1881 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 TMEM131Q92545 1883 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 COL5A1P20908 1838 aaPredicted RBP3□□□□□ -1.93
SNHG1-202ENST00000535689 TEP1Q99973 2627 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms