RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 ZNF605Q86T29 641 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 HPS6Q86YV9 775 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 TMEM102Q8N9M5 508 aaPredicted RBP13.69□□□□□ -0.22
MSRB3-206ENST00000535664 GLB1L3Q8NCI6 653 aaPredicted RBP13.69□□□□□ -0.22
MSRB3-206ENST00000535664 OR2Y1Q8NGV0 311 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 RP9Q8TA86 221 aaKnown RBP13.69□□□□□ -0.22
MSRB3-206ENST00000535664 TESCQ96BS2 214 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 NSL1Q96IY1 281 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 SERINC2Q96SA4 455 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 DPY30Q9C005 99 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 ROGDIQ9GZN7 287 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 SLC26A1Q9H2B4 701 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 WBP11Q9Y2W2 641 aaKnown RBP13.69□□□□□ -0.22
MSRB3-206ENST00000535664 HEMK1Q9Y5R4 338 aaPredicted RBP13.69□□□□□ -0.22
MSRB3-206ENST00000535664 MGAQ8IWI9 3026 aa13.69□□□□□ -0.22
MSRB3-206ENST00000535664 LOC100653049A0A140TA62 436 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 NR5A2O00482 541 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 PEX12O00623 359 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 FBP2O00757 339 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 PCDH17O14917 1159 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 SCAMP2O15127 329 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 FOXS1O43638 330 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 TBX19O60806 448 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 DNAJB6O75190 326 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 KRT34O76011 436 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 UNC5CO95185 931 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 LRATO95237 230 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 IL1RNP18510 177 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 CALB2P22676 271 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 FOLR3P41439 243 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 MAPK12P53778 367 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 CLNS1AP54105 237 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 HNRNPH2P55795 449 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 BTN3A2P78410 334 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 KLC1Q07866 573 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 MAPRE2Q15555 327 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 MMP21Q8N119 569 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 DTWD1Q8N5C7 304 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 TSPEARQ8WU66 669 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 GFM2Q969S9 779 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 SLC7A6OSQ96CW6 309 aaPredicted RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 CMTM5Q96DZ9 223 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 FER1L6-AS2Q96M78 137 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 LYARQ9NX58 379 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 TEX10Q9NXF1 929 aaPredicted RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 DHCR7Q9UBM7 475 aaKnown RBP13.68□□□□□ -0.22
MSRB3-206ENST00000535664 ATP6V1HQ9UI12 483 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 PCDHGB7Q9Y5F8 929 aa13.68□□□□□ -0.22
MSRB3-206ENST00000535664 LOC400499M0QZD8 3231 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 AKAP10O43572 662 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 KLF7O75840 302 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 FURINP09958 794 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 CPA2P48052 419 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 DGKQP52824 942 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 NCALDP61601 193 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 PHC1P78364 1004 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 SLAMF1Q13291 335 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 RUNX2Q13950 521 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 COL9A2Q14055 689 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 FAM53BQ14153 422 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 TLR1Q15399 786 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 PRSS53Q2L4Q9 553 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 ZNF385BQ569K4 471 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 SPANXN4Q5MJ08 99 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 C1orf189Q5VU69 101 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 TCTN3Q6NUS6 607 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 NIPAL1Q6NVV3 410 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 ADAMTS17Q8TE56 1095 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 SPDL1Q96EA4 605 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 ZNF764Q96H86 408 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 MAPKAP1Q9BPZ7 522 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 TUBB6Q9BUF5 446 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 SLC25A23Q9BV35 468 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 REEP4Q9H6H4 257 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 COPS7BQ9H9Q2 264 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 ZNF304Q9HCX3 659 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 KCMF1Q9P0J7 381 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
MSRB3-206ENST00000535664 NAALAD2Q9Y3Q0 740 aa13.67□□□□□ -0.22
MSRB3-206ENST00000535664 A0A1W2PP18 115 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 A0A1W2PR48 441 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 DYTNA2CJ06 578 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 ZNF860A6NHJ4 632 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 SCN2BO60939 215 aa13.66□□□□□ -0.22
MSRB3-206ENST00000535664 NSA2O95478 260 aaKnown RBP13.66□□□□□ -0.22
MSRB3-206ENST00000535664 ESRRAP11474 423 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms