RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KIAA0040Q15053 153 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 RGS21Q2M5E4 152 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 HKDC1Q2TB90 917 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 SLC36A3Q495N2 470 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 TOR1AIP1Q5JTV8 583 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 YOD1Q5VVQ6 348 aaPredicted RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 REP15Q6BDI9 236 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 ZFAND4Q86XD8 727 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 METTL4Q8N3J2 472 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 PCYOX1LQ8NBM8 494 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 KCT2Q8NC54 265 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 OR2L5Q8NG80 312 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 CHTF18Q8WVB6 975 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 GAL3ST3Q96A11 431 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 RGMAQ96B86 450 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 MAGED4Q96JG8 741 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 FCRL1Q96LA6 429 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 NPAS2Q99743 824 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 MACROD1Q9BQ69 325 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 ADI1Q9BV57 179 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 SPRTNQ9H040 489 aaPredicted RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 AKTIPQ9H8T0 292 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 LRTM1Q9HBL6 345 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 C1orf109Q9NX04 203 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 AHSPQ9NZD4 102 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 ZNF232Q9UNY5 417 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 RUVBL1Q9Y265 456 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 CCDC187A0A096LP49 1063 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ATP6AP2A0A1C7CYW4 349 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 EFCAB7A8K855 629 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ATP6AP2O75787 350 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 OR2B3O76000 313 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 GPIP06744 558 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 IL10P22301 178 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 FOXM1Q08050 763 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 TGM3Q08188 693 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 MERTKQ12866 999 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 NR6A1Q15406 480 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ATP6AP1Q15904 470 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 FAM214AQ32MH5 1076 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ATP6AP1LQ52LC2 224 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 C6orf10Q5SRN2 563 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 OGFOD2Q6N063 350 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 HMBOX1Q6NT76 420 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 GALNT18Q6P9A2 607 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ABHD17CQ6PCB6 329 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 C16orf87Q6PH81 154 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 GPR135Q8IZ08 494 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF786Q8N393 782 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 SCAIQ8N9R8 606 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 UTP15Q8TED0 518 aaKnown RBP11.65□□□□□ -0.55
SCARB1-204ENST00000535005 NRBF2Q96F24 287 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 OR6C1Q96RD1 312 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 SLC29A1Q99808 456 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 CIB1Q99828 191 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 HOPXQ9BPY8 73 aaPredicted RBP11.65□□□□□ -0.55
SCARB1-204ENST00000535005 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 GPATCH1Q9BRR8 931 aaKnown RBP11.65□□□□□ -0.55
SCARB1-204ENST00000535005 TBCDQ9BTW9 1192 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 LIN28AQ9H9Z2 209 aaKnown RBP11.65□□□□□ -0.55
SCARB1-204ENST00000535005 ATAD3AQ9NVI7 634 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 RARRES3Q9UL19 164 aa11.65□□□□□ -0.55
SCARB1-204ENST00000535005 KNTC1P50748 2209 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 HYKKA2RU49 373 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 TMEM247A6NEH6 219 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 PLPP1O14494 284 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 MRASO14807 208 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 SCELO95171 688 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 RASAL1O95294 804 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 STATHP02808 62 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 HSD17B1P14061 328 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ACPPP15309 386 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 LBPP18428 481 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 BSGP35613 385 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 CLDN6P56747 220 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 RPS3AP61247 264 aaKnown RBP11.64□□□□□ -0.55
SCARB1-204ENST00000535005 EMX2Q04743 252 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 FAM53BQ14153 422 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 BCL2A1Q16548 175 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 NDUFA9Q16795 377 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 SPIN4Q56A73 249 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 COQ5Q5HYK3 327 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 RAB11FIP2Q7L804 512 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 TTC29Q8NA56 475 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-204ENST00000535005 PPWD1Q96BP3 646 aaKnown RBP11.64□□□□□ -0.55
SCARB1-204ENST00000535005 FAM122AQ96E09 287 aa11.64□□□□□ -0.55
SCARB1-204ENST00000535005 APIPQ96GX9 242 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms