RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RPS17P08708 135 aaKnown RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 CCL3P10147 92 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 PYGBP11216 843 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 SSTR4P31391 388 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 TRHRP34981 398 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 PHBP35232 272 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 SLCO1A2P46721 670 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 CLCN2P51788 898 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 FOXA1P55317 472 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 IGLV3-21P80748 117 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 ASPHQ12797 758 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 LAPTM5Q13571 262 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 HIST2H2ACQ16777 129 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 AP5B1Q2VPB7 878 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 EMC4Q5J8M3 183 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 PAGE2BQ5JRK9 111 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 BICRALQ6AI39 1079 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 HIST2H2AA3Q6FI13 130 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 MAMDC2Q7Z304 686 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 GPR180Q86V85 440 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 MARVELD2Q8N4S9 558 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 OR2W6PQ8NHA6 318 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 TRPC4APQ8TEL6 797 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 RGMAQ96B86 450 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 CMTM7Q96FZ5 175 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 VMP1Q96GC9 406 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 SENP5Q96HI0 755 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 GPR137Q96N19 417 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 TMEM237Q96Q45 408 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 RASL10BQ96S79 203 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 PITHD1Q9GZP4 211 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 DEFB127Q9H1M4 99 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 RPF2Q9H7B2 306 aaKnown RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 TRIM45Q9H8W5 580 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 COPS7BQ9H9Q2 264 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 LYRM4Q9HD34 91 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 ADAP2Q9NPF8 381 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 DTX4Q9Y2E6 619 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 CACNA1CQ13936 2221 aa8.93□□□□□ -0.98
SSBP3-215ENST00000533946 HRNRQ86YZ3 2850 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-215ENST00000533946 A0A087WUV0 522 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 EXOC1LA0A1B0GW35 172 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 SMIM23A6NLE4 172 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 FAM166BA8MTA8 275 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CCL21O00585 134 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ASNA1O43681 348 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 PEX1O43933 1283 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 SLC19A2O60779 497 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CLDN9O95484 217 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 SNRPB2P08579 225 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 FAM58BPP0C7Q3 252 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CD46P15529 392 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TNNI3P19429 210 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 HSD17B3P37058 310 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 PIGAP37287 484 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 PIK3CBP42338 1070 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CA7P43166 264 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 DNASE1L1P49184 302 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CYB561P49447 251 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TAS2R50P59544 299 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 HERVK_113P63132 956 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ERVK-8P63133 956 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 RNF4P78317 190 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 RAE1P78406 368 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TNFRSF17Q02223 184 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 MGAT2Q10469 447 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 GALNT1Q10472 559 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TBL3Q12788 808 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 STX4Q12846 297 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CMPK2Q5EBM0 449 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 LIPJQ5W064 366 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 FAM111BQ6SJ93 734 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CHSY3Q70JA7 882 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 DOLPP1Q86YN1 238 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CYP4Z2PQ8N1L4 340 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 MNS1Q8NEH6 495 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 KIF18AQ8NI77 898 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 RELTQ969Z4 430 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ERVK-6Q9BXR3 956 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 DDX31Q9H8H2 851 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CLK4Q9HAZ1 481 aaKnown RBP8.92□□□□□ -0.98
SSBP3-215ENST00000533946 MYOTQ9UBF9 498 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 HEY2Q9UBP5 337 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TEKT2Q9UIF3 430 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ZNF180Q9UJW8 692 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ERVK-19Q9WJR5 959 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 TIMM22Q9Y584 194 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 CLCA3PQ9Y6N3 262 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 EXPH5Q8NEV8 1989 aa8.92□□□□□ -0.98
SSBP3-215ENST00000533946 A0A1B0GTH9 108 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CCDC189A1A4V9 331 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 C17orf51A8MQB3 221 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SYCE1LA8MT33 242 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 G3V2L1 256 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 STX16-NPEPL1H3BU86 382 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CLDN4O14493 209 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms