RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 GPR143P51810 404 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 SIM1P81133 766 aaPredicted RBP6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 MVKQ03426 396 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 NR0B2Q15466 257 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 PRAMEF17Q5VTA0 474 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 RNF220Q5VTB9 566 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 ZNF613Q6PF04 617 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 UNQ6126/PRO20091Q6UXV3 157 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 HMGN2P46Q86SG4 172 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TCEANCQ8N8B7 351 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TSPEARQ8WU66 669 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TOX2Q96NM4 488 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 CRB3Q9BUF7 120 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 APOOQ9BUR5 198 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TTTY10Q9BZA0 68 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 ACAD8Q9UKU7 415 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 LRRC37A3O60309 1634 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 A0A096LPI6 279 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TOR1BO14657 336 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 BCAS2O75934 225 aaPredicted RBP6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 BCKDHAP12694 445 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 DCDC1P59894 354 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 UBE2NP61088 152 aaKnown RBP6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 RPA4Q13156 261 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 RCAN2Q14206 197 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 SCGB2B2Q4G0G5 96 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 ZNF782Q6ZMW2 699 aaPredicted RBP6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TAS1R1Q7RTX1 841 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 TRIM73Q86UV7 250 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 CEP76Q8TAP6 659 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 DCBLD2Q96PD2 775 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 SH3BGRL2Q9UJC5 107 aa6.12□□□□□ -1.43
UBQLN1-206ENST00000533705 SH3PXD2BA1X283 911 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 VSTM2BA6NLU5 285 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 RFXAPO00287 272 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 H2BFMP0C1H6 154 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 MECP2P51608 486 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ARG2P78540 354 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 RHDQ02161 417 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SWT1Q5T5J6 900 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 KIAA0895LQ68EN5 471 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 FIGNL1Q6PIW4 674 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 PLCZ1Q86YW0 608 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 KLHDC8AQ8IYD2 350 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TMEM130Q8N3G9 435 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 DNAAF1Q8NEP3 725 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 OR56A3Q8NH54 315 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 LRRC15Q8TF66 581 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TCEAL4Q96EI5 215 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ERMAPQ96PL5 475 aaPredicted RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 YTHDF1Q9BYJ9 559 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SAGE1Q9NXZ1 904 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 EPHA6Q9UF33 1036 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SLC22A1O15245 554 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 F8A1P23610 371 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 MSX1P28360 303 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ARSDP51689 593 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 EIF5AP63241 154 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 GALK2Q01415 458 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 DLX2Q07687 328 aaPredicted RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 GINS1Q14691 196 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TSTQ16762 297 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 HNRNPA1L2Q32P51 320 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ATG9BQ674R7 924 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 PYHIN1Q6K0P9 492 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 PLEKHG7Q6ZR37 379 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ZSWIM9Q86XI8 627 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TMEFF1Q8IYR6 380 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 KRTCAP2Q8N6L1 136 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TOR1AIP2Q8NFQ8 470 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 OR52P1PQ8NH57 321 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 HUS1BQ8NHY5 278 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SHISA4Q96DD7 197 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 MNTQ99583 582 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ZFYVE21Q9BQ24 234 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 VNN3Q9NY84 501 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 GPRC5BQ9NZH0 403 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 DNAJC27Q9NZQ0 273 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 hCG_1807616A0A1W2PRN6 198 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 CER1O95813 267 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 PRKACGP22612 351 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 MAOBP27338 520 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 NUDT1P36639 197 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 KIAA1614Q5VZ46 1190 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 CES4AQ5XG92 561 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 SHQ1Q6PI26 577 aaKnown RBP6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ASB18Q6ZVZ8 466 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 RTL10Q7L3V2 364 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ERMP1Q7Z2K6 904 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 C6orf120Q7Z4R8 191 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 TMEM135Q86UB9 458 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 ZNF440Q8IYI8 595 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 GPR137CQ8N3F9 429 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 CHCHD4Q8N4Q1 142 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 NPWQ8N729 165 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 OR5T2Q8NGG2 359 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 OR51A7Q8NH64 312 aa6.11□□□□□ -1.43
UBQLN1-206ENST00000533705 GAL3ST3Q96A11 431 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms