RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 APOPT1Q96IL0 206 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 ZIM3Q96PE6 472 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 SIGLEC12Q96PQ1 595 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 MS4A8Q9BY19 250 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 TSPAN10Q9H1Z9 355 aaPredicted RBP8.15□□□□□ -1.1
COPB1-210ENST00000533533 ELOVL6Q9H5J4 265 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 KCNK13Q9HB14 408 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 ZBTB26Q9HCK0 441 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 RRAGDQ9NQL2 400 aaPredicted RBP8.15□□□□□ -1.1
COPB1-210ENST00000533533 KLHL1Q9NR64 748 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 C19orf25Q9UFG5 118 aaPredicted RBP8.15□□□□□ -1.1
COPB1-210ENST00000533533 LGALS13Q9UHV8 139 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 MID2Q9UJV3 735 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 EMCNQ9ULC0 261 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 MEMO1Q9Y316 297 aa8.15□□□□□ -1.1
COPB1-210ENST00000533533 PHF3Q92576 2039 aaKnown RBP8.15□□□□□ -1.11
COPB1-210ENST00000533533 MAGEB17A8MXT2 336 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 NPIPA5E9PKD4 350 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 PPP6CO00743 305 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 UGDHO60701 494 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 OR4F21O95013 312 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 FHP07954 510 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 MYZAPP0CAP1 466 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 RNH1P13489 461 aaKnown RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 CD46P15529 392 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 IMPDH1P20839 514 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 JAK1P23458 1154 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 HMOX2P30519 316 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CD96P40200 585 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 NAGLUP54802 743 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 MTTPP55157 894 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SLC18A2Q05940 514 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 ACTN3Q08043 901 aaPredicted RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 TRAF3Q13114 568 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 OR1C1Q15619 314 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 NSDHLQ15738 373 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 EXT1Q16394 746 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 MEP1AQ16819 746 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 KHDRBS2Q5VWX1 349 aaKnown RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 SPINK14Q6IE38 97 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 ABHD17CQ6PCB6 329 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SH2D5Q6ZV89 423 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 GPRIN3Q6ZVF9 776 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CRLF3Q8IUI8 442 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SIAH3Q8IW03 269 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CA13Q8N1Q1 262 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CDYL2Q8N8U2 506 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 L3MBTL4Q8NA19 623 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 FAM47BQ8NA70 645 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 TMEM178AQ8NBL3 297 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 ACBD4Q8NC06 268 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SRFBP1Q8NEF9 429 aaKnown RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 RDH11Q8TC12 318 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 M1APQ8TC57 530 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CHTF18Q8WVB6 975 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SELENOMQ8WWX9 145 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 RGMAQ96B86 450 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 TBC1D20Q96BZ9 403 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SCMH1Q96GD3 660 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 FRMD6Q96NE9 622 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 PTCHD1Q96NR3 888 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 KCNC2Q96PR1 638 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 FAM111AQ96PZ2 611 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SERINC2Q96SA4 455 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 UTP23Q9BRU9 249 aaKnown RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 NTMT1Q9BV86 223 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SORBS1Q9BX66 1292 aaKnown RBP8.14□□□□□ -1.11
COPB1-210ENST00000533533 HES7Q9BYE0 225 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SHCBP1LQ9BZQ2 653 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 ROGDIQ9GZN7 287 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 AICDAQ9GZX7 198 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 DMRT3Q9NQL9 472 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 ANKRD10Q9NXR5 420 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 FBXW2Q9UKT8 454 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 NPIPA1Q9UND3 350 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SNX6Q9UNH7 406 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 SPACA6W5XKT8 324 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 MPDZO75970 2070 aa8.14□□□□□ -1.11
COPB1-210ENST00000533533 CCDC151A5D8V7 595 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 GOLGA6L10A6NI86 522 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 A8MUA0 341 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 G3V2L1 256 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 H0YIV9 168 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ASNA1O43681 348 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 MAN1A2O60476 641 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 PRMT3O60678 531 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TBX6O95947 436 aaPredicted RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 SMIM10L1P0DMW3 83 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 CREB1P16220 341 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ABOP16442 354 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 IL10P22301 178 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 PTX3P26022 381 aaPredicted RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 PIK3CBP42338 1070 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ST13P50502 369 aaKnown RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 TLE4Q04727 773 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 PCDH1Q08174 1060 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms