RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 WDYHV1Q96HA8 205 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 HES6Q96HZ4 224 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 FAR2Q96K12 515 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 HIST1H2AHQ96KK5 128 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 TRIB1Q96RU8 372 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 CSF3RQ99062 836 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 HIST1H2AJQ99878 128 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 AIF1LQ9BQI0 150 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 H2AFJQ9BTM1 129 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 SFXN3Q9BWM7 321 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 TSGA10Q9BZW7 698 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 UBQLN3Q9H347 655 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 C6orf203Q9P0P8 240 aaPredicted RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 NDRG3Q9UGV2 375 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 TRMT6Q9UJA5 497 aaKnown RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 CNOT11Q9UKZ1 510 aaKnown RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 DAPP1Q9UN19 280 aa7.14□□□□□ -1.27
NXF1-215ENST00000533440 REXO2Q9Y3B8 237 aaKnown RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 CHCHD2Q9Y6H1 151 aaPredicted RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 EPN1Q9Y6I3 576 aaPredicted RBP7.14□□□□□ -1.27
NXF1-215ENST00000533440 A0A0G2JN53 185 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ZCWPW2A0A1B0GU75 182 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 MYOCOSA0A1B0GUC4 107 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ANKRD33BA6NCL7 494 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 LRIT2A6NDA9 550 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 A8MXE2 369 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ERI3O43414 337 aaKnown RBP7.13□□□□□ -1.27
NXF1-215ENST00000533440 B3GALT2O43825 422 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 HAUS5O94927 633 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 TBX6O95947 436 aaPredicted RBP7.13□□□□□ -1.27
NXF1-215ENST00000533440 FTCDO95954 541 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 IGKV3-11P04433 115 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 FBXO45P0C2W1 286 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 SAT1P21673 171 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 GDF1P27539 372 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 MC3RP41968 323 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 PCYT1AP49585 367 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 CDK9P50750 372 aaKnown RBP7.13□□□□□ -1.27
NXF1-215ENST00000533440 LIM2P55344 173 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 DMTNQ08495 405 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 STX4Q12846 297 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 SNX1Q13596 522 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 THOC5Q13769 683 aaKnown RBP7.13□□□□□ -1.27
NXF1-215ENST00000533440 SERTAD2Q14140 314 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 EFTUD2Q15029 972 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■■■■■ 35.5
NXF1-215ENST00000533440 ADPRMQ3LIE5 342 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 DCST1Q5T197 706 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ADGRE4PQ86SQ3 457 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 TMPRSS11BQ86T26 416 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 HIPK1Q86Z02 1210 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 C9orf40Q8IXQ3 194 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 LMNTD2Q8IXW0 634 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.13□□□□□ -1.27
NXF1-215ENST00000533440 KLHDC8AQ8IYD2 350 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 MYO1HQ8N1T3 1032 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 OR10G3Q8NGC4 313 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ZPLD1Q8TCW7 415 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ATL1Q8WXF7 558 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 TSNARE1Q96NA8 513 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ZFP3Q96NJ6 502 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 DOHHQ9BU89 302 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 UGT2B28Q9BY64 529 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 UBTD1Q9HAC8 227 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ZNF701Q9NV72 531 aaPredicted RBP7.13□□□□□ -1.27
NXF1-215ENST00000533440 ARL15Q9NXU5 204 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ADGRE2Q9UHX3 823 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 CAMK2AQ9UQM7 478 aa7.13□□□□□ -1.27
NXF1-215ENST00000533440 ABCA1O95477 2261 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 A0A088AWK7 358 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 MAGEB16A2A368 324 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 GPR37O15354 613 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 RCBTB2O95199 551 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 ACSL3O95573 720 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 NID1P14543 1247 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 TNNI3P19429 210 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 ZNF10P21506 573 aaPredicted RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 CRYGSP22914 178 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 SERPINB3P29508 390 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 SOX18P35713 384 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 SLCO1A2P46721 670 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 CPA2P48052 419 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 TNK1Q13470 666 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 RCN2Q14257 317 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 CCNG2Q16589 344 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 NTRK2Q16620 822 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 TBCELQ5QJ74 424 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 FNDC7Q5VTL7 733 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 DRICH1Q6PGQ1 229 aaPredicted RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 CAND1Q86VP6 1230 aaKnown RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 THOC6Q86W42 341 aaKnown RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 SYCE1Q8N0S2 351 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 MEIOBQ8N635 442 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 TTLQ8NG68 377 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 OR2L5Q8NG80 312 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 GABPB2Q8TAK5 448 aaPredicted RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
NXF1-215ENST00000533440 LINGO1Q96FE5 620 aa7.12□□□□□ -1.27
NXF1-215ENST00000533440 SENP5Q96HI0 755 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms