RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, human

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSH3-208	ENST00000532181	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	EBPL	Q9BY08	206 aa		11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	ALOXE3	Q9BYJ1	711 aa		11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	RPF2	Q9H7B2	306 aa	Known RBP	11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	PNO1	Q9NRX1	252 aa	Known RBP	11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	ADAM29	Q9UKF5	820 aa		11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	STK38L	Q9Y2H1	464 aa		11.51	□□□□□ -0.57
SSH3-208	ENST00000532181	FLNC	Q14315	2725 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181		A0A088AWK7	358 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	BIRC5	O15392	142 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	SORBS2	O94875	1100 aa	Known RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	ZWINT	O95229	277 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	DDAH2	O95865	285 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	SERPINE1	P05121	402 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	HSD3B1	P14060	373 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	ZNF10	P21506	573 aa	Predicted RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	TACR1	P25103	407 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	HSD3B2	P26439	372 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	HPD	P32754	393 aa	Predicted RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	FOLH1	Q04609	750 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	BTBD16	Q32M84	506 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	SH2D4B	Q5SQS7	431 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	CCNYL2	Q5T2Q4	361 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	C10orf62	Q5T681	223 aa	Predicted RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	NDUFAF5	Q5TEU4	345 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	SLC6A19	Q695T7	634 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	PLAG1	Q6DJT9	500 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	H3F3C	Q6NXT2	135 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	HDX	Q7Z353	690 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	CROCCP2	Q86T23	111 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	NUDT13	Q86X67	352 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	KBTBD2	Q8IY47	623 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	ZNF781	Q8N8C0	355 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	GBP7	Q8N8V2	638 aa	Predicted RBP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	APCDD1L	Q8NCL9	501 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	ELP5	Q8TE02	316 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	NUDT8	Q8WV74	236 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	EGLN2	Q96KS0	407 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	TRMO	Q9BU70	441 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	TUBB6	Q9BUF5	446 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	LHPP	Q9H008	270 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	PLA2G3	Q9NZ20	509 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	PTGFRN	Q9P2B2	879 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	MAP10	Q9P2G4	905 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	VTI1B	Q9UEU0	232 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	DLGAP4	Q9Y2H0	992 aa		11.5	□□□□□ -0.57
SSH3-208	ENST00000532181	SPEN	Q96T58	3664 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	RELN	P78509	3460 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	SAGE2P	A6NJ88	616 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	TMEM200C	A6NKL6	621 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	CLDN4	O14493	209 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PIP5K1B	O14986	540 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	DPM1	O60762	260 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	MYO1D	O94832	1006 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	F10	P00742	488 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	MAPK12	P53778	367 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	SLC18A1	P54219	525 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	ABCE1	P61221	599 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	NAA20	P61599	178 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	ACTN3	Q08043	901 aa	Predicted RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	BST1	Q10588	318 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	INPP5J	Q15735	1006 aa	Predicted RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	RFTN2	Q52LD8	501 aa	Predicted RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	GALNT18	Q6P9A2	607 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	CYP20A1	Q6UW02	462 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	IGFL2	Q6UWQ7	119 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	CLYBL	Q8N0X4	340 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	SIMC1	Q8NDZ2	872 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	CATSPER1	Q8NEC5	780 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	C16orf78	Q8WTQ4	265 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	TWIST2	Q8WVJ9	160 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	C19orf60	Q96EN9	201 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	FCRL1	Q96LA6	429 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	ATP6V1G3	Q96LB4	118 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PAIP2	Q9BPZ3	127 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	CENPK	Q9BS16	269 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	VIPAS39	Q9H9C1	493 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	LIN28A	Q9H9Z2	209 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	RIC8B	Q9NVN3	520 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PNPO	Q9NVS9	261 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	LYAR	Q9NX58	379 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	SIRT5	Q9NXA8	310 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PHF11	Q9UIL8	331 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PPIE	Q9UNP9	301 aa	Known RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	POLR3H	Q9Y535	204 aa	Predicted RBP	11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PCDHA9	Q9Y5H5	950 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	PTPN13	Q12923	2485 aa		11.49	□□□□□ -0.57
SSH3-208	ENST00000532181	ATP6AP2	A0A1C7CYW4	349 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	NPIPB8	E9PQR5	432 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	PCDH17	O14917	1159 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	LSM1	O15116	133 aa	Known RBP	11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	PCDH7	O60245	1069 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	ATP6AP2	O75787	350 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	GPR75	O95800	540 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	CLPS	P04118	112 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	IL3	P08700	152 aa		11.48	□□□□□ -0.57
SSH3-208	ENST00000532181	CT62	P0C5K7	136 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms