RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 VPS41P49754 854 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 MTTPP55157 894 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TGM3Q08188 693 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 ASPHQ12797 758 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SERTAD2Q14140 314 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 POU4F3Q15319 338 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 MPEG1Q2M385 716 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 Q5PR19 223 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TRIM40Q6P9F5 258 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 KLHDC8AQ8IYD2 350 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 PM20D2Q8IYS1 436 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 DND1Q8IYX4 353 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 KRT78Q8N1N4 520 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SIMC1Q8NDZ2 872 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SLC2A12Q8TD20 617 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 PTPMT1Q8WUK0 201 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 KIAA1191Q96A73 305 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 COX4I2Q96KJ9 171 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 JSRP1Q96MG2 331 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SERINC2Q96SA4 455 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 BAG1Q99933 345 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 SLC6A15Q9H2J7 730 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 EPB41L4BQ9H329 900 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 ZNF703Q9H7S9 590 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 SEMA4BQ9NPR2 832 aaPredicted RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 IARS2Q9NSE4 1012 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 CNIH4Q9P003 139 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 EIF3LQ9Y262 564 aaKnown RBP8.28□□□□□ -1.08
VPS11-203ENST00000529545 CLDN16Q9Y5I7 305 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 SPACA6W5XKT8 324 aa8.28□□□□□ -1.08
VPS11-203ENST00000529545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 MYOCOSA0A1B0GUC4 107 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 LRIT2A6NDA9 550 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 ANKDD1BA6NHY2 528 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 C4orf51C9J302 202 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 GOLGA8MH3BSY2 632 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 TRAPPC6AO75865 159 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 FGGP02679 453 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 RFPL3SP0C7P2 107 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 GNAZP19086 355 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 CTSSP25774 331 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 GDF1P27539 372 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 MAGEA6P43360 314 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 HNRNPFP52597 415 aaKnown RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 ZNF136P52737 540 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 PLA2G16P53816 162 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 LIM2P55344 173 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 ACSF3Q4G176 576 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 PIGGQ5H8A4 983 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 PRAMEF20Q5VT98 475 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SEM1Q6ZVN7 128 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS11-203ENST00000529545 LRRC75A-AS1Q8N1F1 130 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 LRRC25Q8N386 305 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 SLC15A4Q8N697 577 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 C2CD4AQ8NCU7 369 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 TMEM52Q8NDY8 209 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 FAM13CQ8NE31 585 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 MCUQ8NE86 351 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 OR2L5Q8NG80 312 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 NUBPLQ8TB37 319 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 PAQR8Q8TEZ7 354 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SMPDL3BQ92485 455 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 PIGTQ969N2 578 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 ISL2Q96A47 359 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 MS4A6EQ96DS6 147 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SPACA9Q96E40 222 aaPredicted RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 DACH2Q96NX9 599 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 EGFL8Q99944 293 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 DESI2Q9BSY9 194 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 REXO4Q9GZR2 422 aaKnown RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS11-203ENST00000529545 DAPP1Q9UN19 280 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 CAMK2AQ9UQM7 478 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 SLC22A14Q9Y267 594 aa8.27□□□□□ -1.09
VPS11-203ENST00000529545 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.09
VPS11-203ENST00000529545 RTTNQ86VV8 2226 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 CYR61O00622 381 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 CLEC3AO75596 197 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 IL18BPO95998 194 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 KRT14P02533 472 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 HRGP04196 525 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 C1GALT1C1LP0DN25 315 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 BMP7P18075 431 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 CERS1P27544 350 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 SERPINB3P29508 390 aa8.26□□□□□ -1.09
VPS11-203ENST00000529545 HNRNPH1P31943 449 aaKnown RBP8.26□□□□□ -1.09
VPS11-203ENST00000529545 MSH2P43246 934 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms