RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TRIM62Q9BVG3 475 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 LRMDAQ9H2I8 198 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 MMP27Q9H306 513 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 SGK2Q9HBY8 427 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 CRNNQ9UBG3 495 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 POU2F3Q9UKI9 436 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 PCDHGA1Q9Y5H4 931 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 ATG2BQ96BY7 2078 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 CEP295Q9C0D2 2601 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 FREM2Q5SZK8 3169 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ASPMQ8IZT6 3477 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 A0A0G2JNG1 304 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CXorf51AA0A1B0GTR3 108 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 SPAARA0A1B0GVQ0 90 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 YJEFN3A6XGL0 299 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 MEI4A8MW99 385 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 E7ENQ6 273 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 BMPR1BO00238 502 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 O00370 1275 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TO15178 435 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 YKT6O15498 198 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ACSL4O60488 711 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 SMC2O95347 1197 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 LDLRP01130 860 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 DNTTP04053 509 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TPOP07202 933 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CD27P26842 260 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 NMBRP28336 390 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 NUDT1P36639 197 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ACADSBP45954 432 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 DAOAP59103 153 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CETN1Q12798 172 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 OVGP1Q12889 678 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CUL2Q13617 745 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 MELKQ14680 651 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 KIR2DS5Q14953 304 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 HLA-BQ31612 363 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CBWD6Q4V339 395 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CBWD3Q5JTY5 395 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 LDB1Q86U70 411 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CHCHD4Q8N4Q1 142 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 POC1AQ8NBT0 407 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 DDI1Q8WTU0 396 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TMCO6Q96DC7 493 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 SCRN2Q96FV2 425 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 DHTKD1Q96HY7 919 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 FAM81BQ96LP2 452 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 SMC6Q96SB8 1091 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TSG101Q99816 390 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 SLX1AQ9BQ83 275 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 GTPBP2Q9BX10 602 aaKnown RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 GPR174Q9BXC1 333 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ULBP1Q9BZM6 244 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 RSPH9Q9H1X1 276 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 LHX5Q9H2C1 402 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ERVMER34-1Q9H9K5 563 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ZDHHC4Q9NPG8 344 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 PRSS16Q9NQE7 514 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 MRPL15Q9P015 296 aaKnown RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ARMCX3Q9UH62 379 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 HOOK1Q9UJC3 728 aaKnown RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 RASAL2Q9UJF2 1139 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 GGA2Q9UJY4 613 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 KLK13Q9UKR3 277 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TSPAN16Q9UKR8 245 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 CLEC4EQ9ULY5 219 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 TTLL3Q9Y4R7 772 aa4.39□□□□□ -1.71
CSDE1-212ENST00000529046 MYO18AQ92614 2054 aaKnown RBP4.39□□□□□ -1.71
CSDE1-212ENST00000529046 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 CACNA1EQ15878 2313 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 MYOFQ9NZM1 2061 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 A0A087WV48 116 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 TEX13DA0A0J9YY54 714 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 PLK4O00444 970 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SLC7A4O43246 635 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 LATO43561 262 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SYNGR3O43761 229 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 RNASEH1O60930 286 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SEMA4FO95754 770 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 GNA14O95837 355 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 IGLV3-25P01717 112 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 FYNP06241 537 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SLC2A3P11169 496 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 POLR2EP19388 210 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SAT1P21673 171 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 FMO5P49326 533 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 MMP15P51511 669 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 MLLT10P55197 1068 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ST8SIA6P61647 398 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 RPS14P62263 151 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SULT2A1Q06520 285 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ADIGQ0VDE8 80 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 PNRC1Q12796 327 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ILKQ13418 452 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 GOLGA7BQ2TAP0 167 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms