RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 FAM71E1Q6IPT2 247 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ADNP2Q6IQ32 1131 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 JMJD6Q6NYC1 403 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 FAM198BQ6UWH4 519 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF793Q6ZN11 406 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PDSS2Q86YH6 399 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ZC3H7AQ8IWR0 971 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 LRRC25Q8N386 305 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CPSF7Q8N684 471 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 METTL27Q8N6F8 245 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM102Q8N9M5 508 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 FAM47BQ8NA70 645 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SLC38A9Q8NBW4 561 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CLEC1AQ8NC01 280 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 MORN4Q8NDC4 146 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 OR7G1Q8NGA0 311 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 OR8J2Q8NGG1 315 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 OR2T11Q8NH01 316 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 DNAJB14Q8TBM8 379 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 BCAS4Q8TDM0 211 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TM4SF18Q96CE8 201 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PPP1R36Q96LQ0 422 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 C3orf30Q96M34 536 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TSSK3Q96PN8 268 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 LRRC37BQ96QE4 947 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CCT8L2Q96SF2 557 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 C1orf50Q9BV19 199 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SLC25A23Q9BV35 468 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 EBPLQ9BY08 206 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 RAD21L1Q9H4I0 556 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 WDR55Q9H6Y2 383 aaPredicted RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 TNFRSF12AQ9NP84 129 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 THUMPD1Q9NXG2 353 aaKnown RBP7.46□□□□□ -1.22
SSBP3-211ENST00000528787 NDE1Q9NXR1 346 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 SH3BP4Q9P0V3 963 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ATP6V1HQ9UI12 483 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 POLHQ9Y253 713 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 AP3M1Q9Y2T2 418 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 ATG4BQ9Y4P1 393 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 PCDHGB3Q9Y5G1 929 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 CAPN7Q9Y6W3 813 aa7.46□□□□□ -1.22
SSBP3-211ENST00000528787 AHCTF1Q8WYP5 2266 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 LOC102723996A0A087X1L8 192 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 A0A0G2JN53 185 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PRSS51A0A1B0GVH4 220 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 A0A1W2PNU3 283 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 A0A1W2PQ72 361 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 A0A1W2PR48 441 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 TCRBV16S1A1N1A0A5B0 115 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF860A6NHJ4 632 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC154A6NI56 674 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 OR6C76A6NM76 312 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ANGPT2O15123 496 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CASC3O15234 703 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 KLK10O43240 276 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 TMPRSS11DO60235 418 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 B4GALT2O60909 372 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ERAL1O75616 437 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 AGR2O95994 175 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 HPP00738 406 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 STATHP02808 62 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 DRD4P21917 467 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PPIBP23284 216 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 GPC1P35052 558 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 XKP51811 444 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 POLR2JP52435 117 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 HNRNPH2P55795 449 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 OR4D2P58180 307 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 DCAF7P61962 342 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 RAE1P78406 368 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 IGLV3-21P80748 117 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 FOLH1Q04609 750 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 TP53BP2Q13625 1128 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PDE7AQ13946 482 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ZNHIT3Q15649 155 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 VPS26BQ4G0F5 336 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 VWA2Q5GFL6 755 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 VWA5B1Q5TIE3 1220 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PRAMEF17Q5VTA0 474 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CES4AQ5XG92 561 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ZCCHC12Q6PEW1 402 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM205Q6UW68 189 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 UNQ6494/PRO21346Q6UXR6 183 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC81Q6ZN84 652 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 COX15Q7KZN9 410 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 NDUFAF7Q7L592 441 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CPEB2Q7Z5Q1 589 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PIGWQ7Z7B1 504 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 HPS6Q86YV9 775 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 SCUBE1Q8IWY4 988 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 KBTBD2Q8IY47 623 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 DND1Q8IYX4 353 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 OR5L2Q8NGL0 311 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 OR8K3Q8NH51 312 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 OR5P2Q8WZ92 322 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 GATA6Q92908 595 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms