RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SLC48A1Q6P1K1 146 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SHISA6Q6ZSJ9 500 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MED25Q71SY5 747 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 NLGN4XQ8N0W4 816 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ESX1Q8N693 406 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 NLGN4YQ8NFZ3 816 aaPredicted RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 DNAJB14Q8TBM8 379 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CT55Q8WUE5 264 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SLC26A1Q9H2B4 701 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CLMPQ9H6B4 373 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 WDR41Q9HAD4 459 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 THSD1Q9NS62 852 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 EHD3Q9NZN3 535 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ATP6V1HQ9UI12 483 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ACSL6Q9UKU0 697 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SCN2AQ99250 2005 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 A0A1W2PS29 197 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 LDB3O75112 727 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 LAMP1P11279 417 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 COX7A2P14406 83 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PCSK2P16519 638 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 IL10P22301 178 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 HPCAL1P37235 193 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 RASSF2P50749 326 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 DGKQP52824 942 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ID2Q02363 134 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 OCA2Q04671 838 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 KRT72Q14CN4 511 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 NCF4Q15080 339 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MPEG1Q2M385 716 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SPANXN4Q5MJ08 99 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FAM69BQ5VUD6 431 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 OR52E8Q6IFG1 317 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 DTX1Q86Y01 620 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TREML1Q86YW5 311 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 OR4N5Q8IXE1 308 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TANKQ92844 425 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 NKD1Q969G9 470 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 EXOSC8Q96B26 276 aaKnown RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ANKRD9Q96BM1 317 aaPredicted RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TESCQ96BS2 214 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MIEF2Q96C03 454 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PPCDCQ96CD2 204 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 COQ8BQ96D53 544 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SPSB2Q99619 263 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CCDC106Q9BWC9 280 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SOX17Q9H6I2 414 aaPredicted RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MIEF1Q9NQG6 463 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PRTFDC1Q9NRG1 225 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TAS2R7Q9NYW3 318 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CCDC167Q9P0B6 97 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SH3BP4Q9P0V3 963 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 GPN3Q9UHW5 284 aaPredicted RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MRPS33Q9Y291 106 aaKnown RBP11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CLDN16Q9Y5I7 305 aa11.43□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SMG1Q96Q15 3661 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 KMT2BQ9UMN6 2715 aaPredicted RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MYOCOSA0A1B0GUC4 107 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FAM234BA2RU67 622 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 C9J4A7 227 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TERTO14746 1132 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TLX3O43711 291 aaPredicted RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FGF17O60258 216 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TBX19O60806 448 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CTNSO60931 367 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 KLF7O75840 302 aaPredicted RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 RECKO95980 971 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 T-ENOLP0DO92 83 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TCN2P20062 427 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MAOAP21397 527 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PIK3R1P27986 724 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 STAT5AP42229 794 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 POLR2JP52435 117 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CLNS1AP54105 237 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 HSD17B7P56937 341 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PHC1P78364 1004 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 RHAGQ02094 409 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TGIF1Q15583 401 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ZNF750Q32MQ0 723 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PGS1Q32NB8 556 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FAM174BQ3ZCQ3 159 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MINDY4Q4G0A6 757 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CPTPQ5TA50 214 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MFSD4BQ5TF39 518 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 GK5Q6ZS86 529 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SCUBE1Q8IWY4 988 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 KLHL29Q96CT2 875 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ZNF764Q96H86 408 aaPredicted RBP11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ZBTB18Q99592 522 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 VN1R1Q9GZP7 353 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 WDR54Q9H977 334 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 SLC52A3Q9NQ40 469 aa11.42□□□□□ -0.58
TRAF3IP2-211ENST00000528599 NECTIN3Q9NQS3 549 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms