RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 KRT6AP02538 564 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 KRT6BP04259 564 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 KRT15P19012 456 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 GALNSP34059 522 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 CRHR1P34998 444 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 KRT6CP48668 564 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 TDGF1P3P51864 188 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 PKNOX1P55347 436 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 FOLH1Q04609 750 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 CCDC153Q494R4 210 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF468Q5VIY5 522 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 WDR93Q6P2C0 686 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 RPS27LQ71UM5 84 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF227Q86WZ6 799 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR4N5Q8IXE1 308 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 GPALPP1Q8IXQ4 340 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 ST13P4Q8IZP2 240 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 TMEM156Q8N614 296 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 FAM98AQ8NCA5 519 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR5L2Q8NGL0 311 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 SSC4DQ8WTU2 575 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 TMEM125Q96AQ2 219 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 DGAT2Q96PD7 388 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 PSMG3-AS1Q96PY0 264 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 TMEM237Q96Q45 408 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 MYOTQ9UBF9 498 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 EMCNQ9ULC0 261 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC5A6Q9Y289 635 aa11.27□□□□□ -0.61
TRAPPC4-209ENST00000528230 MYOCOSA0A1B0GUC4 107 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ARHGAP10A1A4S6 786 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 G3V2L1 256 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 PRKNO60260 465 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 NME2P1O60361 137 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 GUCY1B2O75343 617 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC25A12O75746 678 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ENO1P06733 434 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 KLK1P06870 262 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 NUDT17P0C025 328 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 NR2F6P10588 404 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 MYL2P10916 166 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 TSPAN8P19075 237 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 NME2P22392 152 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLCO1A2P46721 670 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SSR4P51571 173 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 VSNL1P62760 191 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 PLIN5Q00G26 463 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ID2Q02363 134 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC18A2Q05940 514 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 LCP2Q13094 533 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 KRTCAP3Q53RY4 240 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SGO1Q5FBB7 561 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 CCNYL2Q5T2Q4 361 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZYG11AQ6WRX3 759 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 GPRIN3Q6ZVF9 776 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 GALNTL5Q7Z4T8 443 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 RIBC1Q8N443 379 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 METTL6Q8TCB7 284 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC2A12Q8TD20 617 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ZNF721Q8TF20 911 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SENP5Q96HI0 755 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 ART5Q96L15 291 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 MRPL1Q9BYD6 325 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 OR8D2Q9GZM6 311 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 KLHL1Q9NR64 748 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 FARSBQ9NSD9 589 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 COPS7AQ9UBW8 275 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC12A4Q9UP95 1085 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 CROCCQ5TZA2 2017 aa11.26□□□□□ -0.61
TRAPPC4-209ENST00000528230 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 PRRC2CQ9Y520 2896 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 KLRC4-KLRK1H3BQV0 150 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 MANBAO00462 879 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 PLIN3O60664 434 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 ULK1O75385 1050 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 ESRRBO95718 433 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 AIFM1O95831 613 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 PROCP04070 461 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 IGKV3-11P04433 115 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 STSP08842 583 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 MST1P26927 711 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 HK2P52789 917 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 DNAJB13P59910 316 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 TRA2BP62995 288 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 RNF4P78317 190 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 GALNT1Q10472 559 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 TBL3Q12788 808 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 CSTF3Q12996 717 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 MAPKAPK3Q16644 382 aa11.25□□□□□ -0.61
TRAPPC4-209ENST00000528230 SPRED3Q2MJR0 410 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms