RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ADGRE2Q9UHX3 823 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 DAPP1Q9UN19 280 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 MRPS33Q9Y291 106 aaKnown RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 TSC22D4Q9Y3Q8 395 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 MXRA5Q9NR99 2828 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ZANQ9Y493 2812 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 A0A087X1B8 175 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 HMX2A2RU54 273 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 A6NNC1 897 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 SYCE1LA8MT33 242 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 KIAA1324LA8MWY0 1029 aaPredicted RBP9.77□□□□□ -0.85
CPSF1-203ENST00000527916 K7EPI3 171 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CYR61O00622 381 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CCNT2O60583 730 aaKnown RBP9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CTNSO60931 367 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 MTHFD2P13995 350 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CD22P20273 847 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 PHBP35232 272 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CLCN2P51788 898 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 GPR143P51810 404 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 PLA2G16P53816 162 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 LIM2P55344 173 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 MLF1P58340 268 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CHIT1Q13231 466 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 EFTUD2Q15029 972 aaKnown RBP eCLIP9.77□□□□□ -0.851e-6■■■■■ 27
CPSF1-203ENST00000527916 ACAP2Q15057 778 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 FAM83EQ2M2I3 478 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 TMEM35AQ53FP2 167 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 EMC4Q5J8M3 183 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 METTL2BQ6P1Q9 378 aaKnown RBP9.77□□□□□ -0.85
CPSF1-203ENST00000527916 B3GNT6Q6ZMB0 384 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CMC1Q7Z7K0 106 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 LAS2Q8IYD9 372 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 MMGT1Q8N4V1 131 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 ZFP62Q8NB50 900 aaPredicted RBP9.77□□□□□ -0.85
CPSF1-203ENST00000527916 APCDD1LQ8NCL9 501 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 B3GNT7Q8NFL0 401 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF473Q8WTR7 871 aaKnown RBP9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CCT6BQ92526 530 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 NXNL1Q96CM4 212 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 LRRC46Q96FV0 321 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 KCNC2Q96PR1 638 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 TBCDQ9BTW9 1192 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 FUT8Q9BYC5 575 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 LYRM4Q9HD34 91 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 NEUROD4Q9HD90 331 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 PRTFDC1Q9NRG1 225 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 KCMF1Q9P0J7 381 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 CLDN16Q9Y5I7 305 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 ARID1AO14497 2285 aa9.77□□□□□ -0.85
CPSF1-203ENST00000527916 OR14I1A6ND48 311 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 NPIPA2E9PIF3 369 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 NPIPA3F8WFD2 350 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 BCKDKO14874 412 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 URI1O94763 535 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-203ENST00000527916 TUBB4AP04350 444 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 C2P06681 752 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 EPB42P16452 691 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 HOXC12P31275 282 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 ARFIP1P53367 373 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 GXYLT1Q4G148 440 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 FBXO48Q5FWF7 155 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 LIPJQ5W064 366 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 MED27Q6P2C8 311 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 CHSY3Q70JA7 882 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF227Q86WZ6 799 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 CENPLQ8N0S6 344 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-203ENST00000527916 TMEM132CQ8N3T6 1108 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 TMEM156Q8N614 296 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 OR7G3Q8NG95 312 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 FAM222BQ8WU58 562 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 F2RL3Q96RI0 385 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 TTYH2Q9BSA4 534 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 MS4A8Q9BY19 250 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 DEFB126Q9BYW3 111 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 DEFB127Q9H1M4 99 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 ACSS3Q9H6R3 686 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-203ENST00000527916 COPS7BQ9H9Q2 264 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-203ENST00000527916 ADAP2Q9NPF8 381 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 TIMMDC1Q9NPL8 285 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 PSD3Q9NYI0 1048 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 CRIM1Q9NZV1 1036 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 OPTCQ9UBM4 332 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 VTI1BQ9UEU0 232 aa9.76□□□□□ -0.85
CPSF1-203ENST00000527916 MTRF1LQ9UGC7 380 aaKnown RBP9.76□□□□□ -0.85
CPSF1-203ENST00000527916 A0A096LPK6 155 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 A0A0G2JN53 185 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 A0A0G2JNJ9 132 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ESYT3A0FGR9 886 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SUPT3HB4E1H0 165 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 UBXN8O00124 270 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ACOT7O00154 380 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms