RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CARM1Q86X55 608 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 LMNTD1Q8N9Z9 388 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 L3MBTL4Q8NA19 623 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 C19orf18Q8NEA5 215 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 OR6C4Q8NGE1 309 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 UCK2Q9BZX2 261 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 A0A1B0GTW7 788 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 SLC5A10A0PJK1 596 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 TLR4O00206 839 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ARNTLO00327 626 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 OR7A17O14581 309 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 CHST10O43529 356 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 TMCC2O75069 709 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 H6PDO95479 791 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 PCDH1Q08174 1060 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ZNF423Q2M1K9 1284 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 SLCO4C1Q6ZQN7 724 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ASRGL1Q7L266 308 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 AQP11Q8NBQ7 271 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 OR56A3Q8NH54 315 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 SMPDL3BQ92485 455 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 DGCR14Q96DF8 476 aaKnown RBP14.35□□□□□ -0.11
USP47-207ENST00000527733 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 C14orf105Q9NVL8 296 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 CPSF4LA6NMK7 179 aaKnown RBP14.35□□□□□ -0.11
USP47-207ENST00000527733 HCN1O60741 890 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 GBX1Q14549 363 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 NSDHLQ15738 373 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.35□□□□□ -0.11
USP47-207ENST00000527733 IQCCQ4KMZ1 466 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 PRSS36Q5K4E3 855 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 PDZK1Q5T2W1 519 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 METRNLQ641Q3 311 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 TECPR1Q7Z6L1 1165 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ENDOVQ8N8Q3 282 aaKnown RBP14.35□□□□□ -0.11
USP47-207ENST00000527733 IL17RCQ8NAC3 791 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 OR5M3Q8NGP4 307 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 MOSPD2Q8NHP6 518 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 GPR78Q96P69 363 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 FAM129BQ96TA1 746 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 CNTRLQ7Z7A1 2325 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 FOXE1O00358 373 aaPredicted RBP14.35□□□□□ -0.11
USP47-207ENST00000527733 CER1O95813 267 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 GIMD1P0DJR0 217 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 SLC30A6Q6NXT4 461 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ZNF550Q7Z398 422 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 KLHL6Q8WZ60 621 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 OR1E3Q8WZA6 343 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 SLC25A36Q96CQ1 311 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 C1GALT1C1Q96EU7 318 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 S100A13Q99584 98 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 MAPKAP1Q9BPZ7 522 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 COPS4Q9BT78 406 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 HMG20AQ9NP66 347 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 DDX28Q9NUL7 540 aaKnown RBP14.35□□□□□ -0.11
USP47-207ENST00000527733 PCDHGA7Q9Y5G6 932 aa14.35□□□□□ -0.11
USP47-207ENST00000527733 RNASET2O00584 256 aaKnown RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 DLGAP3O95886 979 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CTSLP07711 333 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 HIST1H1TP22492 207 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 TRA2BP62995 288 aaKnown RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 MYBPC1Q00872 1141 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 SERTAD2Q14140 314 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 LCN8Q6JVE9 175 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 SLC6A18Q96N87 628 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 INPP5KQ9BT40 448 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 C6orf106Q9H6K1 298 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 RPL36Q9Y3U8 105 aaKnown RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 TMEM202A6NGA9 273 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 AREL1O15033 823 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PRKACGP22612 351 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 BMP8BP34820 402 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 NR0B2Q15466 257 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CLEC12AQ5QGZ9 265 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 BMP8AQ7Z5Y6 402 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 SNX33Q8WV41 574 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 EGLN2Q96KS0 407 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 SORBS1Q9BX66 1292 aaKnown RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 LGR4Q9BXB1 951 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CRNNQ9UBG3 495 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 GP1BBP13224 206 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 MYL9P24844 172 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CLCN2P51788 898 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 COL9A2Q14055 689 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 KLHL22Q53GT1 634 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 FGD2Q7Z6J4 655 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 C1QTNF2Q9BXJ5 285 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PADI2Q9Y2J8 665 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 A0A0A6YYC8 382 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 I3L1I5 382 aaPredicted RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 KHNYNO15037 678 aaKnown RBP14.34□□□□□ -0.11
USP47-207ENST00000527733 MTHFD2P13995 350 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CCNIQ14094 377 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms