RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PCNPQ8WW12 178 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 HTR3CQ8WXA8 447 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 CPA5Q8WXQ8 436 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 ADAMTS14Q8WXS8 1223 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 IP6K1Q92551 441 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 KCNJ9Q92806 393 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 MTFMTQ96DP5 389 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 CCDC115Q96NT0 180 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 GFM1Q96RP9 751 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 MRPL57Q9BQC6 102 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 NTPCRQ9BSD7 190 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 SOX7Q9BT81 388 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 ASPNQ9BXN1 380 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 LRRC3Q9BY71 257 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 MRPL37Q9BZE1 423 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 DUSP15Q9H1R2 295 aaPredicted RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 OPN3Q9H1Y3 402 aaPredicted RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 SLC25A32Q9H2D1 315 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 OR51J1Q9H342 316 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 REEP4Q9H6H4 257 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 ANKRA2Q9H9E1 313 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 SLAMF7Q9NQ25 335 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 CRTAC1Q9NQ79 661 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 GLRX2Q9NS18 164 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 MTMR10Q9NXD2 777 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 LRP2BPQ9P2M1 347 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 NLKQ9UBE8 527 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 GHRLQ9UBU3 117 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 PSORS1C1Q9UIG5 152 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 GPR160Q9UJ42 338 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 LEF1Q9UJU2 399 aaPredicted RBP5.56□□□□□ -1.52
CD44-225ENST00000527326 NPTNQ9Y639 398 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 CLCA3PQ9Y6N3 262 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 NHSQ6T4R5 1651 aa5.56□□□□□ -1.52
CD44-225ENST00000527326 COL1A2P08123 1366 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 WASH3PC4AMC7 463 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 HSBP1L1C9JCN9 74 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 E9PI62 339 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 NEDD8-MDP1E9PL57 170 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 ZNF670-ZNF695F2Z2N8 137 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 I6L893 689 aaPredicted RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 ARNTLO00327 626 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 KLF4O43474 513 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 PLOD3O60568 738 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 EEDO75530 441 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 RP2O75695 350 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SC5DO75845 299 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 KDM4BO94953 1096 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 TIAF1O95411 115 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 LSM8O95777 96 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 PGK1P00558 417 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SERPINA3P01011 423 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 IL1AP01583 271 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MT-ND1P03886 318 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SERPINA5P05154 406 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 CRYBA1P05813 215 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 HMBSP08397 361 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 CNPP09543 421 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 LINC00614P0C842 121 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SULT1A3P0DMM9 295 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SULT1A4P0DMN0 295 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 G6PDP11413 515 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 RNH1P13489 461 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 ADRB3P13945 408 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 TYRP14679 529 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 TAL1P17542 331 aaPredicted RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 IL1RNP18510 177 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 RHCEP18577 417 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 HDCP19113 662 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 GGT1P19440 569 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 C5AR1P21730 350 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SSTR2P30874 369 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MAT2AP31153 395 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 GRK5P34947 590 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 CEACAM6P40199 344 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MATKP42679 507 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 KIR3DL2P43630 455 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 CRKP46108 304 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 RAB5CP51148 216 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SUCLG1P53597 346 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 RAG2P55895 527 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 ITGA1P56199 1179 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 BCAR1P56945 870 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 PKIAP61925 76 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 NUTF2P61970 127 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 DCDP81605 110 aaKnown RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 BEX3Q00994 111 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 EMX2Q04743 252 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MAD2L1Q13257 205 aaPredicted RBP5.55□□□□□ -1.52
CD44-225ENST00000527326 BIKQ13323 160 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 SERTAD2Q14140 314 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 PTCHD3Q3KNS1 767 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 TMEM95Q3KNT9 176 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MAJINQ3KP22 176 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 FAM74A1Q5RGS3 127 aa5.55□□□□□ -1.52
CD44-225ENST00000527326 C1orf220Q5T0J3 134 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms