RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TRPC5Q9UL62 973 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC39A10Q9ULF5 831 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNJ14Q9UNX9 436 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TRAPPC4Q9Y296 219 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DLGAP4Q9Y2H0 992 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PCDHA10Q9Y5I2 948 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NUBP2Q9Y5Y2 271 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 U3KQ87 197 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 USP54Q70EL1 1684 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TRPM2O94759 1503 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ATRNO75882 1429 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FER1L4A9Z1Z3 1794 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RGPD8O14715 1765 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RGPD5Q99666 1765 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ADGRA2Q96PE1 1338 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RIMBP3CA6NJZ7 1639 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RIMBP3BA6NNM3 1639 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 A0A0B4J293 547 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PNMA8CA0A1B0GUJ8 204 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM234BA2RU67 622 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SDR42E2A6NKP2 422 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 VWC2LB2RUY7 222 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 KDM4EB2RXH2 506 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GPR89AB7ZAQ6 455 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 E5RI56 91 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NEDD8-MDP1E9PL57 170 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 G3V2T6 193 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 H7C1Q1 480 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM189-UBE2V1I3L0A0 370 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC28A1O00337 649 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PPP6CO00743 305 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 UBE2CO00762 179 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PSMA7O14818 248 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 LDLRAD4O15165 306 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PSMD3O43242 534 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SEC14L5O43304 696 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 AKR7A2O43488 359 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CACNG3O60359 315 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SELENOFO60613 162 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RAD1O60671 282 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 BCAS2O75934 225 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 UBXN7O94888 489 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RPP14O95059 124 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TDP2O95551 362 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ACSL3O95573 720 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 HSPA4LO95757 839 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OTCP00480 354 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RAF1P04049 648 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RLN2P04090 185 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FGF4P08620 206 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GPR89BP0CG08 455 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OR8G3PP0DMU2 310 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SNHG28P0DPA3 235 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ERVK-10P10266 1014 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TXNP10599 105 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RALAP11233 206 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CETPP11597 493 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 HLA-EP13747 358 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PKMP14618 531 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 TCF4P15884 667 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MUC1P15941 1255 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 DPEP1P16444 411 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 XRCC1P18887 633 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PRPS1L1P21108 318 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PAICSP22234 425 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 EEF1B2P24534 225 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 IGFBP5P24593 272 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FPR3P25089 353 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PAX6P26367 422 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PCSK1P29120 753 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CD6P30203 668 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC7A1P30825 629 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 HOXA9P31269 272 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CCKARP32238 428 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RPA3P35244 121 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OMPP47874 163 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CDKN1CP49918 316 aaPredicted RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RBP2P50120 134 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ALDH3A2P51648 485 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NR0B1P51843 470 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PLA2G16P53816 162 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 BCAT1P54687 386 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CDH13P55290 713 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SOX8P57073 446 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 STARD6P59095 220 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GABARAPL2P60520 117 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 IL2P60568 153 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 ARHGAP8P85298 464 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MPP1Q00013 466 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 RHDQ02161 417 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 FPGSQ05932 587 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PPP3CAQ08209 521 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 MERTKQ12866 999 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 OVGP1Q12889 678 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 GAGE1Q13065 139 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 PEX6Q13608 980 aa3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 SNTB1Q13884 538 aaKnown RBP3.53□□□□□ -1.84
CLNS1A-209ENST00000527299 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms