RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PIP4P1Q86T03 277 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 SLITRK4Q8IW52 837 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF655Q8N720 491 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-203ENST00000527275 NR1H4Q96RI1 486 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-203ENST00000527275 CIB1Q99828 191 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 BHLHE41Q9C0J9 482 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-203ENST00000527275 TXNDC9O14530 226 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 ZSCAN9O15535 394 aaPredicted RBP17.77■□□□□ 0.43
SMPD1-203ENST00000527275 RPL3P39023 403 aaKnown RBP17.77■□□□□ 0.43
SMPD1-203ENST00000527275 MC1RQ01726 317 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 GPR19Q15760 415 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 PHF19Q5T6S3 580 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 TRIM40Q6P9F5 258 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 RNF145Q96MT1 663 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 KCNC2Q96PR1 638 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 TEFMQ96QE5 360 aaKnown RBP17.77■□□□□ 0.43
SMPD1-203ENST00000527275 CHID1Q9BWS9 393 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 PRDM7Q9NQW5 492 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 ATAD3AQ9NVI7 634 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 AK5Q9Y6K8 562 aa17.77■□□□□ 0.43
SMPD1-203ENST00000527275 FURINP09958 794 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF888P0CJ79 500 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 TPP2P29144 1249 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 LRRC74AQ0VAA2 488 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 NRF1Q16656 503 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF385BQ569K4 471 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 MANEAQ5SRI9 462 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 CCNYL2Q5T2Q4 361 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 OR4C11Q6IEV9 310 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF551Q7Z340 670 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 AMER3Q8N944 861 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZCCHC10Q8TBK6 192 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 UTP15Q8TED0 518 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 GATA6Q92908 595 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 FAM162AQ96A26 154 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 CENPNQ96H22 339 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 REXO5Q96IC2 774 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 PHF12Q96QT6 1004 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 SLC29A1Q99808 456 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 BATF3Q9NR55 127 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 RAB26Q9ULW5 256 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 MRPS2Q9Y399 296 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 CNOT1A5YKK6 2376 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 RNASET2O00584 256 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 C1QCP02747 245 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 BLMHQ13867 455 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 PDE7AQ13946 482 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 TMEM214Q6NUQ4 689 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF793Q6ZN11 406 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZBTB49Q6ZSB9 765 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 SERPINA11Q86U17 422 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 SRFBP1Q8NEF9 429 aaKnown RBP17.76■□□□□ 0.43
SMPD1-203ENST00000527275 OR52E4Q8NGH9 312 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 GAL3ST3Q96A11 431 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 PPCDCQ96CD2 204 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF285Q96NJ3 590 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 IRAK4Q9NWZ3 460 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 TOR4AQ9NXH8 423 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 SEC16AO15027 2179 aa17.76■□□□□ 0.43
SMPD1-203ENST00000527275 NUP214P35658 2090 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-203ENST00000527275 TMEM150CB9EJG8 249 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 H0YJX3 145 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 DENRO43583 198 aaKnown RBP17.75■□□□□ 0.43
SMPD1-203ENST00000527275 CREG1O75629 220 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 GPX2P18283 190 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 SSR2P43308 183 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 HSPA13P48723 471 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 PDX1P52945 283 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 TRIP6Q15654 476 aaKnown RBP17.75■□□□□ 0.43
SMPD1-203ENST00000527275 PRTGQ2VWP7 1150 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 FAM98BQ52LJ0 330 aaKnown RBP17.75■□□□□ 0.43
SMPD1-203ENST00000527275 TMTC4Q5T4D3 741 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 NUDT13Q86X67 352 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 OR8K5Q8NH50 307 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 UGT2B28Q9BY64 529 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 NLNQ9BYT8 704 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 Q9H521 79 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 DDX31Q9H8H2 851 aaKnown RBP17.75■□□□□ 0.43
SMPD1-203ENST00000527275 FGF21Q9NSA1 209 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 RAPGEFL1Q9UHV5 662 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 KNTC1P50748 2209 aa17.75■□□□□ 0.43
SMPD1-203ENST00000527275 URADA6NGE7 173 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 IL3P08700 152 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 CHRNB3Q05901 458 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ZFP36L1Q07352 338 aaKnown RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 DEFB134Q4QY38 66 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 IKBIPQ70UQ0 350 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 PAGE2Q7Z2X7 111 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ARHGEF39Q8N4T4 335 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 OR4A15Q8NGL6 344 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 FBXO30Q8TB52 745 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 NETO1Q8TDF5 533 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 NCLNQ969V3 563 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 MTERF3Q96E29 417 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 SPRTNQ9H040 489 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 TPT1P8Q9HAU6 139 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 CEP250Q9BV73 2442 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 MAGEA13PA6NCF6 341 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 SAC3D1A6NKF1 404 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms